Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122420g00002 ATGATCTGTTCAGTGAAGTTAACAGCATCATCATCATCACCATTCTCTGCTTTCTCAAGCAGAAAGAAGCTTCCTAATCTTCAAACAAGGTCTCAACTTTCCACATTACCCACCATACAAATCGCAAAACAAAACTTGGGTCACTCTCCATTCTTCACCCACAAGCCTCTCTACCTGGCATCCACAACATTGCAGCCAATAACTGCAATAAGAAGAACAAGAAGGGATGTTAATGGCGGTGGTTGTGGTTCCAGCATTGTGTGCCAGGCCTATGAAGCTGACAGACCAATAGAGATTCATCATCATCATCATCATCAGCTTCTTCCTTATGATAGTGAAGAGGTTGCTAAGAAGCTCAAGATGGGACTCTACTTTGGAACATGGTGGGGTCTTAATGTGGTGTTCAACATATATAACAAGAAGGTAGCGGTGGCACACACAATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTTGCTATTTCATTCACTCACATAATCAAGAGCGCTGAGCCTGCTTTCAGTGTCCTGGTGTCAAGGCTCTTCCTCCGACAACCATTCCCTTTGCTGGTTTACCTCTCACTGCTGCCAATCATAGGTGGTTGCGCACTCGCCGCCGCAACCGAGCTCAATTTCAATATCATAGGGTTTATGGGGGCTATGATATCAAACATGGCATTTGTGTTTAGGAATATATTCTCAAAGAAGGGGATGAAGGGCATGTCTGTTAGTGGAATGAACTACTATGCCTGCCTTTCAATCTTGTCTTTATTGATCCTAACACCTTTCGCCATTGCTTTTGAGGGCCCCAAGCTCTGGGCTGCTGGCTGGCAAAAAGCTCTGTCTGAGATTGGTCTCAATTTTATATGGTGGGTAGCAGCTCAGAGTGTGTTTTACCACTTGTATAATCAAGTGTCATACATGTCCCTTAATGAGATTTCACCATTAACATTTAGCATTGGGAACACAATGAAGAGAATCTCAGTGATTGTCTCTTCCATCATTATCTTCCACACGCCACTTGAGCCCATCAATGCACTTGGTGCTGCCATTGCAATTCTTGGTACCTTCCTCTATTCACAGGCTAAACAGCAGTGA 1101 0.4414 MICSVKLTASSSSPFSAFSSRKKLPNLQTRSQLSTLPTIQIAKQNLGHSPFFTHKPLYLASTTLQPITAIRRTRRDVNGGGCGSSIVCQAYEADRPIEIHHHHHHQLLPYDSEEVAKKLKMGLYFGTWWGLNVVFNIYNKKVAVAHTIGHVAATVSMSKVAISFTHIIKSAEPAFSVLVSRLFLRQPFPLLVYLSLLPIIGGCALAAATELNFNIIGFMGAMISNMAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFAIAFEGPKLWAAGWQKALSEIGLNFIWWVAAQSVFYHLYNQVSYMSLNEISPLTFSIGNTMKRISVIVSSIIIFHTPLEPINALGAAIAILGTFLYSQAKQQ 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122420g00002 366 Pfam Triose-phosphate Transporter family 142 361 IPR004853 -
Stsc122420g00002 366 PANTHER SOLUTE CARRIER FAMILY 35 142 365 - -
Stsc122420g00002 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 207 - -
Stsc122420g00002 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 264 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122420g00002 Stsc-Chr122420 7502 9228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122420g00002 19 366 Antiporters AT1G61800 58.543 9.57e-145 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122420g00002 K15283 - gmx:100804205 448.743