Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122374g00002 ATGAAGAGGAAGAGCTCGCTGGTGAAGAAGACAGTGGTGTGCTTCTTACGACGACGGGAAAGGTCTGGGTCGGCAGAGGTGGGCTTAAGGTTGTTGATGGCTAGCTCTAAGGGCAGGGTAGAGGCAGACAGCTTCAGGATCAAGAGGTGGATTAAGGTTTCCAACATAGCATTGAGGATACTGTTTCCTAATGAGCGGAGACTCTGCCAAAGAGTCTTTGGCTCCTCCTCTGACATCTCAGATAAGTGTTTTATTCAGGGTTGCTCTGAATTGGCACGAATTTTACTGTATTTCGCGGATCATTTTGCAAAGAATAGCCTTGAATATCAGAAGACGCTTCACTCTGGACTGAAGCAATCAACGTTAAAGAAAGATTGTGTAGAGCAATTAAGGATTACTTCTTCACGGGGTTGGAGGATTTGGTTCACTCAGATGGAATAA 441 0.4535 MKRKSSLVKKTVVCFLRRRERSGSAEVGLRLLMASSKGRVEADSFRIKRWIKVSNIALRILFPNERRLCQRVFGSSSDISDKCFIQGCSELARILLYFADHFAKNSLEYQKTLHSGLKQSTLKKDCVEQLRITSSRGWRIWFTQME 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122374g00002 146 Gene3D Exocyst complex component Exo70 21 122 - -
Stsc122374g00002 146 PANTHER EXOCYST COMPLEX PROTEIN EXO70 41 105 IPR004140 GO:0000145|GO:0006887
Stsc122374g00002 146 Pfam Exo70 exocyst complex subunit 48 106 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc122374g00002 146 SUPERFAMILY Cullin repeat-like 40 103 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122374g00002 Stsc-Chr122374 8696 11059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122374g00002 47 106 EXO70 exocyst subunit family AT5G58430 53.333 6.25e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122374g00002 K07195 - ahf:112702737 100.908