Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122374g00001 ATGGACCGCCTCGGGGACGCCTTCAATGAAAGAGACACCCTTGAATTAATCCTCCAAGATTACCCCATAGTTAATGTTATGGAAGGAATGTCTTCTCTTTCTACCCACATTTCTTGGATGATCAATCTGCTGGAGATCCATTTGGAAGCCATATGGGAAAACGGAGCTTTCCGGAGCTATGATTATTATTATTACTTAATCACGAATGCTTGTTACATAGTAAGGAAGGTCCGTGATACTCAATTGGACACCATTTTGGGGCGTATTTGGCTCCAAGAACAAAGTGCCAAAATCTGTGAGTACATCAAGCGCTGTGGAAGAATAAGCTCATGGATTAAGGTGTTGGACTTCTTGAAGTTGGACAGCAATGGTGTGACGGCAGAATCAATGAAAGGGAAGCTCCGATTGTTCAACGAGCAGTTTCCCGAAATGTTTCGTGAACAATCTTTATGGTTAGTCCTGGATGAACAGCTAATGGAATCGTTGATCTTGGTCTTTGTCCTAGCATATGAATATTTCATTGAGAGGTTCCGTGATATTCTTCTTGATCAAGCTGATGAACACATCACTTATTCAACTTCGAGAATTGAAAGTTGTCTCAGGCGCATATTGGAGGAATACTTGGAGCTGGAGGAACATTTAAGGGAAACTAGACTTAAAGCCGTGCGGGAGTTCATTTATTAA 684 0.4167 MDRLGDAFNERDTLELILQDYPIVNVMEGMSSLSTHISWMINLLEIHLEAIWENGAFRSYDYYYYLITNACYIVRKVRDTQLDTILGRIWLQEQSAKICEYIKRCGRISSWIKVLDFLKLDSNGVTAESMKGKLRLFNEQFPEMFREQSLWLVLDEQLMESLILVFVLAYEYFIERFRDILLDQADEHITYSTSRIESCLRRILEEYLELEEHLRETRLKAVREFIY 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122374g00001 227 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 200 IPR004140 GO:0000145|GO:0006887
Stsc122374g00001 227 Gene3D Exocyst complex component Exo70 1 209 - -
Stsc122374g00001 227 Pfam Exo70 exocyst complex subunit 2 201 IPR046364 GO:0000145|GO:0005546|GO:0006887
Stsc122374g00001 227 Coils Coil 200 220 - -
Stsc122374g00001 227 SUPERFAMILY Cullin repeat-like 1 203 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122374g00001 Stsc-Chr122374 7965 8648 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122374g00001 1 198 EXO70 exocyst subunit family AT5G58430 35.377 4.25e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122374g00001 - K06059 ahf:112702737 196.823