Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122353g00002 ATGACTATAAGACCCCGCGTGCATGTGTACATGTTAGAATCATATGACGTAATTAGAGGGCTTCTTGAGGCTAGATTGAGCAAGGAACCAATGTTGGAGCTAGTAGGTAACGTTGAAGCCAAGCGGGTTCAAGCTAGGGTTGAAGTTTGTCAAGTACTGGTGTTGGAGTGTGAGAAAATAGGTTGTCTACGAGAGGGTAAGGGAACAGGGAGCTTTGGTAAGAGGAGAAACAAGACTCACACACTCTGTGTGAGGTGCGGCCGCCGCAGCTTCCACCTTCAGAAGAGTCGCTGCGCCGCCTGCGCTTTCCCCGCCGCACACAAGAGAAAGTATAACTGGAGCGTGAAGGCGATTCGCAGAAAGACAACCGGAACCGGAAGGATGAGGTACCCCCGCCACGTGCCTCGCCGATTTAAGAGCAGCTTCAGAAAAGGTACTGAAACTACACCAAGGAAGAAGGGAGCAGCTGCTTCTACTTAA 480 0.5083 MTIRPRVHVYMLESYDVIRGLLEARLSKEPMLELVGNVEAKRVQARVEVCQVLVLECEKIGCLREGKGTGSFGKRRNKTHTLCVRCGRRSFHLQKSRCAACAFPAAHKRKYNWSVKAIRRKTTGTGRMRYPRHVPRRFKSSFRKGTETTPRKKGAAAST 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122353g00002 159 Gene3D - 66 151 IPR011331 GO:0003735|GO:0005840|GO:0006412
Stsc122353g00002 159 ProSitePatterns Ribosomal protein L37e signature. 68 87 IPR018267 GO:0003735|GO:0005840|GO:0006412
Stsc122353g00002 159 FunFam Ribosomal protein L37 65 152 - -
Stsc122353g00002 159 MobiDBLite consensus disorder prediction 122 159 - -
Stsc122353g00002 159 PANTHER 60S RIBOSOMAL PROTEIN L37 66 158 - -
Stsc122353g00002 159 SUPERFAMILY Zn-binding ribosomal proteins 66 119 IPR011332 GO:0006412
Stsc122353g00002 159 MobiDBLite consensus disorder prediction 122 139 - -
Stsc122353g00002 159 Pfam Ribosomal protein L37e 67 117 IPR001569 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122353g00002 Stsc-Chr122353 2891 5085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122353g00002 66 159 Cytoplasmic Ribosomal Protein Gene Family AT1G15250 81.915 3.23e-53 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122353g00002 K02922 - csv:101221537 183.341