Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122353g00001 ATGTGCATTATTTATATGCAACTGATATCTTCTAATTCATCTTGCAGTCATGTAATTATGATACTTGTGGATGTGGCAAATGGGAAGCAGAGGCATATCCCATATAGAGACTCTAGACTAACATTTCTTCTTCAGGACTCTCTTGGTGGAAACTCAAAAACAATGATAATTGCCAATGTTAGCCCTTTTATATGGAAAATTGAAAAAAGGAAGCTTGCGGATCAAGAAACGGAATTTGGAAGCAAAACAGAGCAGGGTTCCACGCATATGCATGGAAGAGCACGCATATGCGTGCTGCTCATACCCCAACCCACGCCTAAGTAA 324 0.4012 MCIIYMQLISSNSSCSHVIMILVDVANGKQRHIPYRDSRLTFLLQDSLGGNSKTMIIANVSPFIWKIEKRKLADQETEFGSKTEQGSTHMHGRARICVLLIPQPTPK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122353g00001 107 ProSiteProfiles Kinesin motor domain profile. 1 86 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Stsc122353g00001 107 PANTHER KINESIN-LIKE PROTEIN KIN-12D 14 62 IPR044986 -
Stsc122353g00001 107 Gene3D Kinesin motor domain 7 71 IPR036961 -
Stsc122353g00001 107 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 68 IPR027417 -
Stsc122353g00001 107 Pfam Kinesin motor domain 16 63 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122353g00001 Stsc-Chr122353 1 1321 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122353g00001 10 62 Calmodulin-binding Proteins AT5G65930 49.057 3.53e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122353g00001 K10400 - gmx:100805305 96.6709