Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122238g00001 ATGGAAGATCATAAAAGGCACGAAAGAAAACCCAGAATTCTTTGCCTCCATGGATACAGGACCAGTGGCGAAATCCTGAAGAAATCAATAATGTCACGATGGCCAGAAACTATAACACATGAAAAGCTGGACCTTGTGTTTCTTAAGGGCAAGTTTCCAGCACTTGGAAAATCCACGATTGATGGTGTTTCTGATCCTCCTTACTATGAATGGTTCATAACCGATGAGGATTTTTTATTGGTCAGGAAATGCGAAGAATGTGTAGCATACATTGAAGATTACATGATAAAGAATGGTCCTTTTGATGGTTTACTTGGATTCTCTCAGGGCGCAGTTGTAGCATCTGCAATGGCTGCAATGCAAGCCAAGGGAACAGCACTTGGGAAGGTAGAGAAAATCAAGTTTCTAATTTTGATATCAGGAGCCAAGTTTGGTGGAATAAACATGTATGAAATGCCTAAACTGGCTTCCCATGCATTGTCAGAACCAATTGATTTACCATCTCTCCACATTATAGGAGAATTGGATTTCCAGAGACAAGAGAGCATTCTTTTGCTTGAAGCATTCAGGGACCCTGTTGTCATTCATCACCCTACAGGCCACACAATCCCCACTCTAGGTTAG 624 0.4151 MEDHKRHERKPRILCLHGYRTSGEILKKSIMSRWPETITHEKLDLVFLKGKFPALGKSTIDGVSDPPYYEWFITDEDFLLVRKCEECVAYIEDYMIKNGPFDGLLGFSQGAVVASAMAAMQAKGTALGKVEKIKFLILISGAKFGGINMYEMPKLASHALSEPIDLPSLHIIGELDFQRQESILLLEAFRDPVVIHHPTGHTIPTLG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122238g00001 207 Pfam Serine hydrolase (FSH1) 9 205 IPR005645 -
Stsc122238g00001 207 Gene3D alpha/beta hydrolase 7 207 IPR029058 -
Stsc122238g00001 207 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 5 207 - -
Stsc122238g00001 207 SUPERFAMILY alpha/beta-Hydrolases 8 203 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122238g00001 Stsc-Chr122238 3007 6360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122238g00001 9 205 Sulfurtransferasese or Rhodanese AT1G09280 28.261 8.42e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122238g00001 - - vvo:131650459 269.626