Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122195g00002 ATGAGCGGTGAGGATGATGACCCAGAAAGAGCGAAATTGAGATCAAGAAGAAGACAAGAGAAGGAGGAAGAAGGAAGATCGTCGTTGAATTCGAAGCAGTATTCAAAAGTGGTGAACTTTCACCGTGATCTCATGGCTGGGGCGGTTATGGGTGGGGTGGTTCACACCATTGTGGCCCCTATTGAGAGGGCGAAGCTTCTTCTGCAGACGCAAGAGAGCAATTTGGCTATTGTTTCGAGCGGGCGTCAGAGATTCAAGGGCATGTTTGATTGTATACTACGCACTGTTAGAGAAGAAGGTGTTCTCTCTTTGTGGCGTGGCAATGGCAGCAGTGTTCTTCGCTATTATCCTTCTGTTGCACTCAATTTCTCTCTCAAGGATCTATACAGGAGCATGTTAAGAGGTGAAAACTCTCATGACATTACTATCTTCTCCGGTGCATCTGCCAATTTTGTCGCTGGTGCTGCTGCCGGTTGTACAGCACTTATCTTAGTATACCCCCTTGACATTGCACATACCCGCCTGGCTGCCGACATCGGAAGGAAAGAGGCGCGTCAGTTTCGTGGCATCTACCATTTCCTAGCTACCATATTCCAAAAGGATGGGATCCGCGGGATTTACAGGGGCCTTCCTGCATCCTTACAGGGGATGGTGGTCCACAGGGGCCTTTACTTTGGAGGATTTGATACGATGAAAGAGATCCTATCCGAAGAAGAATCCAAGCCCGAGATTGCTCTGTGGAAGCGCTGGTTGGTAGCTCAGGCGGTGACAACCTCGGCGGGGTTGATATCTTACCCCTTAGACACGGTTCGCAGGAGAATGATGATGCAGTCAGGCATGGAACGGCCGGTGTACCACAGCACCCTGGATTGCTGGAGGAAGATCTATAGGACAGAGGGGTTGGCTTCATTCTACCGCGGCACGGTTTCGAATGTGTTTAGGAGCACAGGTGCTGCAGCTATCTTAGTCTTGTATGATGAGGTTAAGAAATTCATGAATTGGGGGAGATTGTAA 1014 0.4941 MSGEDDDPERAKLRSRRRQEKEEEGRSSLNSKQYSKVVNFHRDLMAGAVMGGVVHTIVAPIERAKLLLQTQESNLAIVSSGRQRFKGMFDCILRTVREEGVLSLWRGNGSSVLRYYPSVALNFSLKDLYRSMLRGENSHDITIFSGASANFVAGAAAGCTALILVYPLDIAHTRLAADIGRKEARQFRGIYHFLATIFQKDGIRGIYRGLPASLQGMVVHRGLYFGGFDTMKEILSEEESKPEIALWKRWLVAQAVTTSAGLISYPLDTVRRRMMMQSGMERPVYHSTLDCWRKIYRTEGLASFYRGTVSNVFRSTGAAAILVLYDEVKKFMNWGRL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122195g00002 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 145 234 IPR018108 -
Stsc122195g00002 337 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 32 334 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc122195g00002 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 38 132 IPR018108 -
Stsc122195g00002 337 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Stsc122195g00002 337 PRINTS Mitochondrial carrier protein signature 207 225 IPR002067 GO:0055085
Stsc122195g00002 337 PRINTS Mitochondrial carrier protein signature 107 127 IPR002067 GO:0055085
Stsc122195g00002 337 PRINTS Mitochondrial carrier protein signature 253 275 IPR002067 GO:0055085
Stsc122195g00002 337 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Stsc122195g00002 337 PRINTS Mitochondrial carrier protein signature 160 178 IPR002067 GO:0055085
Stsc122195g00002 337 PRINTS Adenine nucleotide translocator signature 249 265 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc122195g00002 337 PRINTS Adenine nucleotide translocator signature 40 52 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc122195g00002 337 PRINTS Adenine nucleotide translocator signature 145 158 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc122195g00002 337 PRINTS Adenine nucleotide translocator signature 118 130 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc122195g00002 337 PRINTS Adenine nucleotide translocator signature 85 106 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Stsc122195g00002 337 Pfam Mitochondrial carrier protein 148 237 IPR018108 -
Stsc122195g00002 337 Pfam Mitochondrial carrier protein 244 333 IPR018108 -
Stsc122195g00002 337 Pfam Mitochondrial carrier protein 38 135 IPR018108 -
Stsc122195g00002 337 MobiDBLite consensus disorder prediction 1 29 - -
Stsc122195g00002 337 FunFam probable ADP,ATP carrier protein At5g56450 42 334 - -
Stsc122195g00002 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 248 331 IPR018108 -
Stsc122195g00002 337 MobiDBLite consensus disorder prediction 1 30 - -
Stsc122195g00002 337 Gene3D Mitochondrial carrier domain 42 334 IPR023395 -
Stsc122195g00002 337 SUPERFAMILY Mitochondrial carrier 36 327 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122195g00002 Stsc-Chr122195 7273 10648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122195g00002 38 329 Antiporters AT5G13490 39.597 5.69e-64 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122195g00002 K05863 - qsa:O6P43_015892 526.554