Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122180g00001 ATGACTTTCCATACACTTGAAGATGCTTCTGCTTTTTATAAAGAGTATGCTAAACGTGTTGGATTCTCTACTAAGATAAGGAACACTAATAGGTGCAAGGAGACGAAGGAAATAAAGAACCAACTTATCACATGTAATAGGGAGGGGAAATGGACTTCTGAGATACCGTGTGTGGAGAAGAGTAATCCTACGTGTGGTGCGAACTGTCCTGCTAGGATTTATGTGCACATAGTGAAGAAAACGTTACGCTGGTGTATTTCGAAGGTGGTTCTTAATCACTCACATCCGTGTTGCCCTGATCAATCCCGAATGTTGCCTCAGCATAGGGAGTTAAGTATGCAAGTTCGTCGCACTATTGAAATTAATGAGGAAGCTGGCATTAGACCGAATCAAACATACAAAGCGCTTGTGGCAGCTGCCGGTGGGCACAACGAGTTGAGATTCATTGAAAAAGATGTTAGAAACTTCATTACAAGGGATATTCGGAACGTGTCAGAAGATCAAGATGCGAACGGGCTTGGAGGTTACTTATATAGAATGAAGGAGCAAAACAAAGATTTCTTTTATGAAATCGCTATTGACGGTGATAATAGGATAAAGAACGTGTTCTGGGCGGATGCAAGGAGCAGGGTTGCGTGTGAATATTTTGGAGACGTTGTCTCGTTTGACACAACGTATAATAAAAACAGATACGATCTTCCTTTTGCTTCTTTTGTTGGGGTTAATCATCATGGCCACTCCATACTCCTTGGATGTGCTGTAATGAAGAACGAGGACATTGAATCCTTCAAATGGCTTTTCGATTGTTGGATTCGTTGTATGGGAGGGAAGGCACCAAAAGGTATCATTACGGACCAATGTCCGTCGATGCCAATCGTGATTCAACACTGTATGCCAACAACCATGCATAGGTGGTGCATTTGGCATATCATGAAGAAGGTTCCTCAAAAATTGAATGGATTCAAGGGCCACGTTGACATCGAACAAGAGATGAGTCAGATCGTGTGGTCATCTATGTCATCAGTTATCTTTGAAAGAGACTGGAAAGTCTTTATTACAAAGTATGAGCTGGGTGAGAATAAGTGGCTATCAGAGCTATATGTGGATCGTTTTTTATGGGTTCCTATGTATCTTGACGTCAACTTCTGGGCTGGGATGAGGAGTACACAGAGGAGTGAGAGCATGCATGCTTTTTTTAACAAATTCATTACTCGGAGGAGCTTCTTGATCCAACTTGCGAAGCAATACGACAATTGCCTAGGAGATAAAGAACAGAAAGAGAGGTAA 1287 0.4188 MTFHTLEDASAFYKEYAKRVGFSTKIRNTNRCKETKEIKNQLITCNREGKWTSEIPCVEKSNPTCGANCPARIYVHIVKKTLRWCISKVVLNHSHPCCPDQSRMLPQHRELSMQVRRTIEINEEAGIRPNQTYKALVAAAGGHNELRFIEKDVRNFITRDIRNVSEDQDANGLGGYLYRMKEQNKDFFYEIAIDGDNRIKNVFWADARSRVACEYFGDVVSFDTTYNKNRYDLPFASFVGVNHHGHSILLGCAVMKNEDIESFKWLFDCWIRCMGGKAPKGIITDQCPSMPIVIQHCMPTTMHRWCIWHIMKKVPQKLNGFKGHVDIEQEMSQIVWSSMSSVIFERDWKVFITKYELGENKWLSELYVDRFLWVPMYLDVNFWAGMRSTQRSESMHAFFNKFITRRSFLIQLAKQYDNCLGDKEQKER 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122180g00001 428 Pfam FAR1 DNA-binding domain 12 98 IPR004330 -
Stsc122180g00001 428 Pfam MULE transposase domain 219 313 IPR018289 -
Stsc122180g00001 428 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 427 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122180g00001 Stsc-Chr122180 2 2351 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc122180g00001 MULE 1.9e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122180g00001 - - ahf:112705389 518.464