Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122101g00004 ATGGCTCCCGTCCACACTCTCCTTTCTTTCATCATCACACTCACAGCAACACTTGCAGCCGCTTCCACTGAGAAGAAGAGCACCTTCATAGTGCAAGTCCACCATGAAGCCAAGCCCTCCATCTTCCCAACCCACAAGCACTGGTATGAGTCCTGTCTTGCATCTATCTTCGACCATGCTACTGCCACTGAAACCACCACCGCCGCCGCCTCCATCCTCCACACTTACGACACCGTTTTTCACGGCTTCTCAGCAAAGCTCTCACCTTTAGAGGCCCAGAAACTGGAATCCCTGTCCCACGTCATCGCAGTCATCCCGGAGCAGGTCCGCCAACTACATACTACCCGCTCGCCGCAGTTCTTGGGCCTCAAAACTGCCGACAACGCCGGTCTCCTCAAGGAGACGGATTTCGGTTCAGATCTCGTCATCGGAGTACTTGACACCGGTATCTGGCCCGAGAGAGAGAGCTTCAACGATCGCGACCTTGGTCCTGTTCCTCCCAACTGGAAGGGCAGCTGCGTCCCCGGAATGGGCTTCCCCGCCACCTCATGCAACCGAAAGATCATTGGGGCTCGCTACTTCTACGCCGGCTACGAGGCCACCAACGGCAAGATGAATGAAACACTCGAGTACCGTTCTCCCAGGGACTCCGATGGTCACGGCACCCACACCGCTTCCANNNNNNNNNNGGCCTCCACCCTCGGCTACGCCAAGGGAATGGCTGCCGGCATGGCTCCCAAGGCCCGCCTCGCCGTCTACAAGGTCTGCTGGATCGGCGGTTGCTTCGACTCTGACATTCTCGCCGCATTCGATGCCGCCGTGGCCGACGGCGTCCACGTTGTCTCCCTCAGCGTTGGGGGTGTAGTGGTGCCCTACTATCTCGACGTCATCGCCATTGGTGCTTTCGGAGCCTCCGAGGCTGGCGTGTTCGTGTCTGCTTCCGGCGGAAACAGCGGCCCCGGAAGCCTCACGGTGACGAATGTGGCCCCTTGGATGACCACAGTCGGTGCAGGAACCATAGACAGAGATTTCCCGGCAAAAGTGAGGCTGGGGAATGGCAAGATCATAAGAGGAGTCAGCGTGTATGGGGGACCGGGTCTCACTCCGGGTCGGATGTACCCGCTTATGTATGCAGGGAACGAAGCCGGCGGAGACGTTTACTCTTCTTCTCTTTGCATGGAGGGCTCCTTGGATCCTAAGATGGTGAGAGGCAAGATTGTGGTTTGCGACAGAGGCATCAACTCCAGAGCCGCCAAAGGTGAGGTCGTCAAGGAAGCAGGAGGCGTTGCTATGATACTCACCAATGGTGTCTTTGACGGCGAAGGCTTGGTGGCAGACTCCCACGTCCTCCCCGCAATCTCCGTCGGCGCTCGCGGAGGCGACGGCATTAGAAAGTACATATCGGCGGCGTCGCAGTCGCGGTCACCACCCACAGCCACTATAGAGTTCGAGGGTACGAGGCTTGGAGTGAAGCCTGCTCCCGTGGTGGCGTCTTTCTCTGCTCGTGGGCCCAACCCCCAATCCCCTGAGATTGTGAAGCCCGATGTGATAGCTCCCGGGCTCAACATCCTGGCTGCATGGCCCGATAGTATTGGCCCTTCTGGTGTCGCCTCTGATGAACGAAGGACTGAGTTCAACATTCTTTCTGGCACTTCAATGGCATGTCCTCATGTTTCTGGTTTGGCTGCACTGCTTAAGGCTGCCCACCCCAATTGGAGCCCCGCCGCCATCAGGTCTGCTCTCATGACCACTGCTTACACCGTAGACAACAGAGGAGGCGCCATGCTGGACGAGTCCACCGGAAACGCCTCCTCTGTTTTCGACTACGGTGCTGGCCATGTTCATCCCGAGAAGGCCATGAACCCTGGCTTGGTTTACGATATCTCCTCCTACGATTATGTGGACTTCTTATGCAACTCCAATTACACCGCCAAGAATATCAGAACCGTCACCAGGAAGGGTGCTGACTGCAGCGGTGCCAAGAGTGCCGGTCATGCCGGCAATTTGAATTACCCGGCCCTTTCTGCAGTGTTCCAGTACCATGGGAAGACACACATGTCCACACACTTCATTAGAAGCGTGACCAATGTTGGGGACCCAAGCTCCGTGTACAAGGTGGCCATTGAACCCCCTGAGGCAATGAGAGTGACGGTGGAGCCAGAGACGCTTTCTTTCAGGAGGTTGGGTCAGAAATTGAACTTCCTAGTGAGAGTGGAAGCTAGGGGAGTTAAACTTTTTTTGGGGAGTACAAGTGTGAAGAGTGGTTCCATTGTTTGGTCTGATAGCAAGCACACCGTTACAAGTCCCTTGATTATTACAATGCAGCATTCTCTCTAG 2337 0.5605 MAPVHTLLSFIITLTATLAAASTEKKSTFIVQVHHEAKPSIFPTHKHWYESCLASIFDHATATETTTAAASILHTYDTVFHGFSAKLSPLEAQKLESLSHVIAVIPEQVRQLHTTRSPQFLGLKTADNAGLLKETDFGSDLVIGVLDTGIWPERESFNDRDLGPVPPNWKGSCVPGMGFPATSCNRKIIGARYFYAGYEATNGKMNETLEYRSPRDSDGHGTHTASXXXXASTLGYAKGMAAGMAPKARLAVYKVCWIGGCFDSDILAAFDAAVADGVHVVSLSVGGVVVPYYLDVIAIGAFGASEAGVFVSASGGNSGPGSLTVTNVAPWMTTVGAGTIDRDFPAKVRLGNGKIIRGVSVYGGPGLTPGRMYPLMYAGNEAGGDVYSSSLCMEGSLDPKMVRGKIVVCDRGINSRAAKGEVVKEAGGVAMILTNGVFDGEGLVADSHVLPAISVGARGGDGIRKYISAASQSRSPPTATIEFEGTRLGVKPAPVVASFSARGPNPQSPEIVKPDVIAPGLNILAAWPDSIGPSGVASDERRTEFNILSGTSMACPHVSGLAALLKAAHPNWSPAAIRSALMTTAYTVDNRGGAMLDESTGNASSVFDYGAGHVHPEKAMNPGLVYDISSYDYVDFLCNSNYTAKNIRTVTRKGADCSGAKSAGHAGNLNYPALSAVFQYHGKTHMSTHFIRSVTNVGDPSSVYKVAIEPPEAMRVTVEPETLSFRRLGQKLNFLVRVEARGVKLFLGSTSVKSGSIVWSDSKHTVTSPLIITMQHSL 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122101g00004 778 Gene3D - 637 775 - -
Stsc122101g00004 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 113 IPR037045 -
Stsc122101g00004 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 65 770 IPR045051 -
Stsc122101g00004 778 FunFam subtilisin-like protease SBT1.5 341 488 - -
Stsc122101g00004 778 SUPERFAMILY Subtilisin-like 112 624 IPR036852 GO:0004252|GO:0006508
Stsc122101g00004 778 Pfam Fibronectin type-III domain 668 772 IPR041469 -
Stsc122101g00004 778 CDD PA_subtilisin_like 348 481 - -
Stsc122101g00004 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 550 560 IPR023828 -
Stsc122101g00004 778 Pfam PA domain 391 460 IPR003137 -
Stsc122101g00004 778 ProSiteProfiles Serine proteases, subtilase domain profile. 117 620 - -
Stsc122101g00004 778 FunFam Subtilisin-like protease SBT1.5 140 352 - -
Stsc122101g00004 778 Gene3D - 341 489 - -
Stsc122101g00004 778 Pfam Subtilase family 138 598 IPR000209 GO:0006508|GO:0008236
Stsc122101g00004 778 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Stsc122101g00004 778 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Stsc122101g00004 778 PRINTS Subtilisin serine protease family (S8) signature 549 565 IPR015500 -
Stsc122101g00004 778 FunFam Subtilisin-like protease SBT1.5 637 775 - -
Stsc122101g00004 778 Pfam Peptidase inhibitor I9 28 113 IPR010259 -
Stsc122101g00004 778 FunFam Subtilisin-like protease SBT1.9 17 113 - -
Stsc122101g00004 778 Gene3D Peptidase S8/S53 domain 140 633 IPR036852 GO:0004252|GO:0006508
Stsc122101g00004 778 CDD Peptidases_S8_3 111 586 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122101g00004 Stsc-Chr122101 8608 11302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122101g00004 28 778 Subtilisin-like Serine Gene Family AT3G14240 72.823 0.0 1134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122101g00004 - - zju:107434872 1186.4