Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc1220g00001 ATGAAACTTCCATCTCTATTCAAAACCAAAGAAGAGGAGCTACATCGAAGAAATAATGTTCTTCCATGGCAGAACTTATTTCCATCTTGTAGCAACTACCCGAAGACTCTCTCGTTTCGCGGCGGAGACGGTGATGACTTCTTCAAGACGGTGAACTCCGTGTTCTTGGACCCGACAGCTATTGAAGCAATCACCACTCAGGACACACCATCAGCGGAGTCATGGATCACAACAACAACAACCTCATCGGAATCCGCTTCAACGGAGTCAGAGGAGTACTACCGGTACTGCAATGAGGACGGAGAGTCACTGGAGATGGTGGTTCGCGGCGTGAAGAGATCGGAGAGGCTGTTGTTCGAAGCTGGAGACACGAGCTCCATCTTGGAGAAGGCGAAGGGAAGCAGCAGTAGTAATAGTAGCTTGCCATTCAAGGAAAGTGTGGTTGTGGCTATGGAATCTGAAGATCCATACAGTGATTTCAGAAGGTCAATGGAGGAGATGGTGGAGTGTCATGGAGTGAAGGATGATTGGGAGGGTTTGGAAGAGCTTCTTTGTTGGTATCTTAAGGTTAATGGTAAAAACAACCATGGATTCATCGTTTCTGCTTTTGTGGATTTGCTTGTTACCATTGCAGTTCAAGCTTCTACTAAGAACAACTCAACTACTTCTTCTTCCACCTCTTCCTCTTCTTCTAAGTCTTCTGATTCAACAACTATTACTACTTATTCTTCTGCTCTTTCTTCTTTTTCTTCATCTTCTCCCTTGTGTTTATCTCAGGGACACAATGAAAATGTTCATCATAATCAACATAGTAATGATAGTGCTACTAGTTAA 834 0.4388 MKLPSLFKTKEEELHRRNNVLPWQNLFPSCSNYPKTLSFRGGDGDDFFKTVNSVFLDPTAIEAITTQDTPSAESWITTTTTSSESASTESEEYYRYCNEDGESLEMVVRGVKRSERLLFEAGDTSSILEKAKGSSSSNSSLPFKESVVVAMESEDPYSDFRRSMEEMVECHGVKDDWEGLEELLCWYLKVNGKNNHGFIVSAFVDLLVTIAVQASTKNNSTTSSSTSSSSSKSSDSTTITTYSSALSSFSSSSPLCLSQGHNENVHHNQHSNDSATS 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc1220g00001 277 NCBIfam uncharacterized plant-specific domain TIGR01568 147 210 IPR006458 -
Stsc1220g00001 277 Pfam Transcriptional repressor, ovate 153 210 IPR006458 -
Stsc1220g00001 277 ProSiteProfiles OVATE domain profile. 149 209 IPR006458 -
Stsc1220g00001 277 MobiDBLite consensus disorder prediction 218 277 - -
Stsc1220g00001 277 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 82 210 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc1220g00001 Stsc-Chr1220 4203 5036 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc1220g00001 Ovate 3.5e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc1220g00001 - - gmx:100527123 237.654