Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122088g00002 ATGATCCTGTGCACCGCGATCAACCACTGTCTATGCGACGGCATAGGCACTTCACAGTTTCTACATGCGTGGGCCCAACTCACAAAGAACCCCAACACTAAATTGACCATTATACCCTTCCATGGGAGACACGTGTTGAAACCTCGTGATCCCCCTCAGGTGAGGTTCTCTCACCCGGGATACACCGAAACAAAATCCACTCAACAAGTGGAACTCCTCAAGTTGATGCAATCTCAACCGCTAGTTGCCACGTCATTCACCTTTGGGCCCCACCAAGTGCTTCAACTAAAGAAACAATGTATTCCCTCCTTGAAATGCACAACCTTCGAGGCCGTTGCGGCTCACACGTGGCGCTCGTGGGTTGGCTCGGTTAACCTGAATTCTGATCTTACGGTGAAATTACTTTTTTCAATCAACATAAGAAAATGTATGAACCTCCCACAAGGGTATTATGGGAATGGATTTGTTCTAGGGTGTGCACAAAGTAAAGTGAGGGATTTAGTGAATGACTATAATAACCTTCACCATGGGGTGAAATTAGTGCAACAAGCTAAGGCTACTACTTTGGACAATGATGGGGAATACATTAGGTCAATGATTGATTTCATGGAGGACAAGAATGTAAGAACTGATCTTTCTACTAGCATGGTTATATCACAATGGTCTAAGCTAGGGTTAGAAGATTTGGACTTTGGAGAAGGGAAGCCATTGCACATGGGACCTTTAACTAGTGATGTCTATTGCTTGTTTGTTCCGGTGGCCGGCGACGCCAACTCGGTTAGGGTTCTCGTGTCGGTGCCGGAGAGTATGGTGGAGAGCTTCCGGCACCACATGATGGTGAAGGAAAGTTGGGAAAGTCATCATCATGAGAAGAATGAAGATGTTAACACAAATGGATATCATGTGCAAGAAAAGTTGCTAATATGA 927 0.4531 MILCTAINHCLCDGIGTSQFLHAWAQLTKNPNTKLTIIPFHGRHVLKPRDPPQVRFSHPGYTETKSTQQVELLKLMQSQPLVATSFTFGPHQVLQLKKQCIPSLKCTTFEAVAAHTWRSWVGSVNLNSDLTVKLLFSINIRKCMNLPQGYYGNGFVLGCAQSKVRDLVNDYNNLHHGVKLVQQAKATTLDNDGEYIRSMIDFMEDKNVRTDLSTSMVISQWSKLGLEDLDFGEGKPLHMGPLTSDVYCLFVPVAGDANSVRVLVSVPESMVESFRHHMMVKESWESHHHEKNEDVNTNGYHVQEKLLI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122088g00002 308 Pfam Transferase family 1 278 - -
Stsc122088g00002 308 Gene3D - 63 279 IPR023213 -
Stsc122088g00002 308 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 274 - -
Stsc122088g00002 308 Gene3D - 1 62 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122088g00002 Stsc-Chr122088 13861 14990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122088g00002 3 241 Monolignol Biosynthesis Gene Families AT5G48930 28.016 2.08e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122088g00002 - - aip:107645267 573.933