Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122088g00001 ATGTTAGAATTTGTAGAACTCCCGGATTGTTTTTACCCTAGGGATGCAATTACCATAATAACCCCATGTGCTCCAACACCAAAACACTCACTCTATCTATCAAATCTTGATGATCAAAAGTTCCTAANNNNNNNNNNATTCAAGAAATCAGTGAGCATTGAATCCTTGAAGTGTTCCTTGTCAAGGGTCCTTGTTGATTACTACCCTTTAGCTGGAAGATTGATGAGAAGAAACAATAAGAATGATGATGATGATGATGATGATGATCACAAGCTTGAGGTGAATTGCAATGGAGAAGGTGCTGTTCTTGCTGAGGCTTTCATGGATGCAACTATTGAAGACTTGATTGAGGCTTCTAAGGTTCCTAACAAGTCATGGAGGAAGCTTATGTATAAGGTTGAAGCTCAAAGTTTCTTGGATATTCCTCCTCTTGTTCTTCAGGTAACTAATCTCCGTTGTGGGGGCATGATCCTGTGCACCGCGATCAACCACTGTCTATGCGACGGCATAGGCACTTCACAGTTTCTACATGCGTGGGCCCAACTCACAAAGAACCCCAACACTAAATTGACCATTATACCCTTCCATGGGAGACACGTGTTGAAACCTCGTGATCCCCCTCAGGTGAGGTTCTCTCACCCGGGATACACCGAAACAAAATCCACTCAACAAGTGGAACTCCTCAAGTTGATGCAATCTCAACCGCTAGTTGCCACGTCATTCACCTTTGGGCCCCACCAAGTGCTTCAACTAAAGAAACAATGTATTCCCTCCTTGAAATGCACAACCTTCGAGGCCGTTGCGGCTCACACGTGGCGCTCGTGGGTTGGCTCGGTTAACCTGAATTCTGATCTTACGGTGAAATTACTTTTTTCAATCAACATAAGAAAATGTATGAACCTCCCACAAGGGTATTATGGGAATGGATTTGTTCTAGGGTGTGCACAAAGTAAAGTGAGGGATTTAGTGAATGACTATAATAACCTTCACCATGGGGTGAAATTAGTGCAACAAGCTAAGGCTACTACTTTGGACAATGATGGGGAATACATTAGGTCAATGATTGATTTCATGGAGGACAAGAATGTAAGAACTGATCTTTCTACTAGCATGGTTATATCACAATGGTCTAAGCTAGGGTTAGAAGATTTGGACTTTGGAGAAGGGAAGCCATTGCACATGGGACCTTTAACTAGTGATGTCTATTGCTTGTTTGTTCCGGTGGCCGGCGACGCCAACTCGGTTAGGGTTCTCGTGTCGGTGCCGGAGAGTATGGTGGAGAGCTTCCGGCACCACATGATGGTGAAGGAAAGTTGGGAAAGTCATCATCATGAGAAGAATGAAGATGTTAACACAAATGGATATCATGTGCAAGAAAAGTTGCTAATATGA 1392 0.431 MLEFVELPDCFYPRDAITIITPCAPTPKHSLYLSNLDDQKFLXXXXFKKSVSIESLKCSLSRVLVDYYPLAGRLMRRNNKNDDDDDDDDHKLEVNCNGEGAVLAEAFMDATIEDLIEASKVPNKSWRKLMYKVEAQSFLDIPPLVLQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKNPNTKLTIIPFHGRHVLKPRDPPQVRFSHPGYTETKSTQQVELLKLMQSQPLVATSFTFGPHQVLQLKKQCIPSLKCTTFEAVAAHTWRSWVGSVNLNSDLTVKLLFSINIRKCMNLPQGYYGNGFVLGCAQSKVRDLVNDYNNLHHGVKLVQQAKATTLDNDGEYIRSMIDFMEDKNVRTDLSTSMVISQWSKLGLEDLDFGEGKPLHMGPLTSDVYCLFVPVAGDANSVRVLVSVPESMVESFRHHMMVKESWESHHHEKNEDVNTNGYHVQEKLLI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122088g00001 463 Gene3D - 218 434 IPR023213 -
Stsc122088g00001 463 Gene3D - 15 217 IPR023213 -
Stsc122088g00001 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 18 425 - -
Stsc122088g00001 463 Pfam Transferase family 18 433 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122088g00001 Stsc-Chr122088 12637 14990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122088g00001 14 396 Monolignol Biosynthesis Gene Families AT5G48930 29.197 1.37e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122088g00001 - - aip:107645267 836.639