Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc122035g00001 ATGGAAAATGGAAGTCTATGGGATCTTCTTCATGGGGCTAGCAAGAAGAAAAAGCTCGATTGGGATATGCGTCTGAAGATAGCTCTCGGATCAGCGCAAGGACTGGCCTATCTACACCATGATTGTAGTCCTCGGATCATCCACAGAGATGTGAAATCTTCAAACATTTTGCTGGATGGAGACTTTGAGCCCCATCTCACTGATTTTGGCATAGCCAAGGTTCTTTGCCCCTCAAAGTCGCACACTTCGACATACATAATGGGCACAATTGGCTACATAGACCCCGAGTATGCTAGAACCTCCCGGCTCACCGAGAAGTCCGATGTGTATAGCTATGGCATTGTCTTACTTGAGTTACTAACTGGAAGGAAAGCTGTTGACAATGAATCCAACCTCCATCATCTGATTTTGTCCAAGACAGCAAACAATGCAGTGATGGAAACTGTTGATCCGGACATCACTGCCACATGCAAGGACCTTGGAGCAGTGAAGAAGGTCTTTCAGCTTGCTCTATTATGCACAAAGCGGCAACCGTCAGATAGGCCGACGATGCACGAAGTGGCACGTGTCCTCGGCAGCCTCATGCCGTCTCCGGCCGCCGTCACCACCGCCGTTTCGGCCAAACAAGAAGCAACCCTTACACCAACTTCACTACCATGTGCAAAAGCTCCATCATCATGCTACATTGATGAATATGCAAACCTCAAGACACCACACTTGGTTAATTGCCCTTCAATGAGTACCTCTGATGCACAGCTTTTCCTCAAGTTTGGAGAGGTTATCTCTCAAAATAGTGAGTGA 801 0.4757 MENGSLWDLLHGASKKKKLDWDMRLKIALGSAQGLAYLHHDCSPRIIHRDVKSSNILLDGDFEPHLTDFGIAKVLCPSKSHTSTYIMGTIGYIDPEYARTSRLTEKSDVYSYGIVLLELLTGRKAVDNESNLHHLILSKTANNAVMETVDPDITATCKDLGAVKKVFQLALLCTKRQPSDRPTMHEVARVLGSLMPSPAAVTTAVSAKQEATLTPTSLPCAKAPSSCYIDEYANLKTPHLVNCPSMSTSDAQLFLKFGEVISQNSE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc122035g00001 266 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 1 191 - -
Stsc122035g00001 266 Gene3D Transferase(Phosphotransferase) domain 1 1 212 - -
Stsc122035g00001 266 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 202 - -
Stsc122035g00001 266 ProSiteProfiles Protein kinase domain profile. 1 195 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc122035g00001 266 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Stsc122035g00001 266 SUPERFAMILY Protein kinase-like (PK-like) 1 191 IPR011009 -
Stsc122035g00001 266 Pfam Protein kinase domain 1 188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc122035g00001 266 SMART serkin_6 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc122035g00001 Stsc-Chr122035 8852 10446 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc122035g00001 1 265 Receptor kinase-like Gene Family AT5G62230 61.887 9.89e-106 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Stsc122035g00001 Pkinase 3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc122035g00001 K20718 - gmx:100782307 461.07