Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121962g00002 ATGGCATCTTGCAGCCGAGTCGATCAGGGAACATGCGAATGGGATGAAGTGAGAATATCTAATTGGTTCGGGCAAGAGGGATCAACAGCCGGGGAGCAGGAGGACACTTACGATATGGGTGGTGAGATTCGAGTTGAATTACTAAAGCCTGAAGGAGACGGAGAGGCTGTGGTGGAGGAGGCCATGTATGATTTGGCTGGTGATGGGGCCGAGTCTTTTATGAACACCGATGGTATGGATGGAAGGGCGTCTGAACCAATTATCGCTAATGAGGAGATCAGAGCTGAGGATGTCTTGCAAATGGAATTTAGCACTCCAGAAGAAGCAAGCGGATTCTATGATAATTATAGCAAAGTGAAGGGATTCGCGGCAAGACAGGGCAAGAAGATACGGAATAATGCTGGGGAAATTGTGAGGTACACCTTCGTTTGCAATAGACAGGGGTATATAGAGAAGAAATGGTTGGAGAAAGAGGACAGAAAAAGGGAGCATAAGGTTATAACACGGTGTGGATTTCTTGCGGAGTTGAGGATAAAGAGGAAAGACGGGAGTGGGAAATGGTACGTTTCCCGTTTTGTGGACGAGCATAATCATGATCTCCGACCTGGGAAGTTTGTGAATTATTTGAGCCGGCACAGGAAGATATTAGAAGTAGAAGTGGCACATTTAACCAGCATGAGAGATATTGGGATACGTATTCCGAAGATATACGAATTGTTCGCAGCACATAGGGGTGTTCGCGGTGCGGTTTGGGTCGGTTTTGAGTAA 768 0.4661 MASCSRVDQGTCEWDEVRISNWFGQEGSTAGEQEDTYDMGGEIRVELLKPEGDGEAVVEEAMYDLAGDGAESFMNTDGMDGRASEPIIANEEIRAEDVLQMEFSTPEEASGFYDNYSKVKGFAARQGKKIRNNAGEIVRYTFVCNRQGYIEKKWLEKEDRKREHKVITRCGFLAELRIKRKDGSGKWYVSRFVDEHNHDLRPGKFVNYLSRHRKILEVEVAHLTSMRDIGIRIPKIYELFAAHRGVRGAVWVGFE 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121962g00002 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 39 245 - -
Stsc121962g00002 255 Pfam FAR1 DNA-binding domain 112 201 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121962g00002 Stsc-Chr121962 6306 9467 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc121962g00002 FAR1 1.5e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121962g00002 - - aip:107620408 265.003