Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121932g00001 ATGCCACAGGTTGTTCTTGCTCAATTCTTTCTAATTCCTCCCTTGGACTTCAAGAAAGGGTTGTTGGTTGTTCTTGCTCAATTCTGTTCTAATTCCTCCCTTGGACTTCAAGAAAGGGTTGTTGGTACGAGTTGGGGATTATTAGTTTCTGAGGCCAGTAGGGAGGTTTCTGATCGCGGATCGGCAAGGAGGTCAAGAAGCAGAAAACAAGCGCATTTAGCTGACCTTGAGATGCAGGTTGAAAAGCTGAAACCGGAAAATGCAACCCTATACAAGGAGTTTAACGATGCTAGAACACAATTTCATGAGGTGGATACGAGAGCTAAGAACCTTTGTGGTCACACCTTCCTAAAGAAAAATAAGAGCATCGCTTGGAAGAAAGCTACCAGGAGAATGTTTCTATACTCTTGA 411 0.4331 MPQVVLAQFFLIPPLDFKKGLLVVLAQFCSNSSLGLQERVVGTSWGLLVSEASREVSDRGSARRSRSRKQAHLADLEMQVEKLKPENATLYKEFNDARTQFHEVDTRAKNLCGHTFLKKNKSIAWKKATRRMFLYS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121932g00001 136 CDD bZIP_plant_GBF1 68 102 IPR045314 GO:0003700|GO:0006355
Stsc121932g00001 136 SMART brlzneu 53 110 IPR004827 GO:0003700|GO:0006355
Stsc121932g00001 136 Gene3D - 52 103 - -
Stsc121932g00001 136 Pfam bZIP transcription factor 54 97 IPR004827 GO:0003700|GO:0006355
Stsc121932g00001 136 SUPERFAMILY Leucine zipper domain 53 102 IPR046347 GO:0003700|GO:0006355
Stsc121932g00001 136 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 54 111 IPR004827 GO:0003700|GO:0006355
Stsc121932g00001 136 PANTHER BZIP TRANSCRIPTION FACTOR RISBZ3-RELATED 53 104 IPR044168 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121932g00001 Stsc-Chr121932 11006 14681 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121932g00001 54 111 bZIP Transcription Factor Family AT5G24800 51.724 1.02e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121932g00001 bZIP_1 4.3e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121932g00001 K25784 - gmx:778131 70.4774