Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121915g00003 ATGGATGGTGGCACCACGAGTGCGATGAACCTAGCAACCATGCCGATCTCGGGCTTGACGCAGGTGATGCTCAATACCACCAAGGGAGGACCCTCGATGGAGCTGCGTTTCCAAATAGAGTCACAAAGTGTGAACCTAATTGAAGTGAGTGTTGAGGATGAGTCGGCAAGGAACAACGGTCCGGGCAGAAAGGAAGAAGTTAGCATCGACAAGAGCAGCGACAGCGGCAGCAATAAGCTTAAGGCTTGTGCAGAAAGGACTCATTCCCATGCTATTAAAACCACTATTGCAGTAGAGGCTTTATTCCAAGGTATTGAAGTCCAATTTTCTATAATTGGTGTGAAGTTTGAAGAATTAAACAGAGATTTGTTTGAGAAATGCAAAGAGATAGTTCATAAGTGTATTGATGATGCTAAGAGGGAGAAAACTGGAATACATGCTGTGGTATTGTTGGTGTTACTGCATGTTATGGGTTCAACCAATTTGGACTCTGATAATAATCCACCTGTAGCTTCTCCTCACAAGATGCTCCATATATGTGGTATTGATGATGCTAAGAGGAGAAAAGGGGAATACATGATGCGGTCAATGTTGATAAAACTGTTGCTTATGGTGCTGGCTGCCATGCAAGCTACTTTGCTTAGAGAAAGTTATAGCATTGTACCAAACATGGTTGACGCGTCCCAAAGGCCGATCCAAAATCCCTTAATTTTTCAAAACATGAATTCGTTACAGATAGTTCCAAACCAACTATGA 756 0.4286 MDGGTTSAMNLATMPISGLTQVMLNTTKGGPSMELRFQIESQSVNLIEVSVEDESARNNGPGRKEEVSIDKSSDSGSNKLKACAERTHSHAIKTTIAVEALFQGIEVQFSIIGVKFEELNRDLFEKCKEIVHKCIDDAKREKTGIHAVVLLVLLHVMGSTNLDSDNNPPVASPHKMLHICGIDDAKRRKGEYMMRSMLIKLLLMVLAAMQATLLRESYSIVPNMVDASQRPIQNPLIFQNMNSLQIVPNQL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121915g00003 251 MobiDBLite consensus disorder prediction 57 72 - -
Stsc121915g00003 251 Gene3D Actin; Chain A, domain 4 67 126 - -
Stsc121915g00003 251 Pfam Hsp70 protein 66 150 IPR013126 GO:0005524|GO:0140662
Stsc121915g00003 251 MobiDBLite consensus disorder prediction 51 80 - -
Stsc121915g00003 251 SUPERFAMILY Actin-like ATPase domain 86 150 IPR043129 -
Stsc121915g00003 251 Gene3D - 127 150 - -
Stsc121915g00003 251 PANTHER HEAT SHOCK PROTEIN 70KDA 84 151 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121915g00003 Stsc-Chr121915 13530 14285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121915g00003 82 162 Calmodulin-binding Proteins AT3G12580 48.193 8.26e-16 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121915g00003 K03283 - aip:107637015 87.8113