Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121912g00004 ATGATCACTGTTAGTCAATCAGGAAATGCAAACTTCAAAACAGTTCAAAGTGCCATTGATTCTGTTCCCAAAGGAAACTCTCAATGGATTCACATCAAAATTTCCCCTGGTGTTTATAGAGAAAAGGTGTTAATATCGAGCGGCAAACAATGCATATATCTTGAAGGAGGTGGCAGCGAATCCACGAGTATTGAATGGAATGACCACGGCAATGCACATTTCAGTGCTACTCTCATCATAAAAGTCCCCAACATTGTTGCAAGGGGAATTGCCTTCAAGAACACGTACAACACTGTAGAGACAGACAAAGTGATTCAAGCAGTGGCAGTAAGGGCTCATGAGGACAAGATTGCTTTCTATGATTGTCAATTTATAGGGGTGCAAGATACCCTGTTTGATTCATATGGCCGCCATTACTACAAAGGTTGCTACATTCAAGGTGGAGTTGATTTCATCTTTGGCAGTGCTCAAACAATCTTTGAGGATAGCACCATATTTTTCTCAATGGGACTTGGCCCCAAACTAGATGGAGTGTTCATAGGGAGCGAAAGGGAAAAAGATGACAGCAGTGGCTATGTCTTCAAAAATTGTAACTTTACTGGAACTGGAGGAAAAGCTACGCTTGGCAGATCTTTGAATGCTTATGGCAGAGTTATTATAGCCAATTCTGTGCTATCTGATGTTGTTCGACCAGAGGGTTGGAATTCTTTGAAAAATGATAGATCAAAGATAACGTTTGTGGAGGAGGGAAACACAGGTCCAGGAGCAGACAAATCGAAGCGTGTGCCATGGATGAAACACCTTAGCGGATCTGAACTTGATCACTTCTTGGACATGTCTTATATTGACAATGAAGGATGGATTGCTAATATTCCCTCATTATGA 885 0.4136 MITVSQSGNANFKTVQSAIDSVPKGNSQWIHIKISPGVYREKVLISSGKQCIYLEGGGSESTSIEWNDHGNAHFSATLIIKVPNIVARGIAFKNTYNTVETDKVIQAVAVRAHEDKIAFYDCQFIGVQDTLFDSYGRHYYKGCYIQGGVDFIFGSAQTIFEDSTIFFSMGLGPKLDGVFIGSEREKDDSSGYVFKNCNFTGTGGKATLGRSLNAYGRVIIANSVLSDVVRPEGWNSLKNDRSKITFVEEGNTGPGADKSKRVPWMKHLSGSELDHFLDMSYIDNEGWIANIPSL 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121912g00004 294 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 289 - -
Stsc121912g00004 294 SUPERFAMILY Pectin lyase-like 2 289 IPR011050 -
Stsc121912g00004 294 Gene3D - 1 293 IPR012334 -
Stsc121912g00004 294 Pfam Pectinesterase 2 282 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121912g00004 Stsc-Chr121912 9722 11437 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121912g00004 2 238 Carbohydrate Esterase AT2G19150 46.888 7.83e-63 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121912g00004 - - adu:107492287 498.434