Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121856g00003 ATGACGCGAACAAGGTTTATTTGCAGCTATGGCGGGAAGATCCAGCTCATTGGTCGCGCCAACAAGCTCACCTATGTCGGCGGCATAAATAAGCTGCTTTATGTTGACTGCAGAATTTCATTCAAAGACATGGTTGCCGAAGTCTCCGGTCTCTTTAACATCGCCGCCGGCGGCGACGTCTTCTTAAAATACCAACTTCCCGGTAGGGATGGACTCAATTCTCTCGTCTCCCTCAACAACGACAATGACCTCTGCAGAATGATGCTCAAGTTTGATCGACTCTACTCCCTTGACCCTAGAGTATCCCGCATAAGACTCTTCGTCTTCCAAATCCCTAACAAACCTCTTAATTCAGTTAAGCCAAATTCTGATCAGTTATCTCCGAATCTTGGGAAGGATAATGGGTTTAACAGCTTTAGAGCGGATTTAGAAGGCTGGGACTCCAGCTCTTGGAGTTAA 459 0.4662 MTRTRFICSYGGKIQLIGRANKLTYVGGINKLLYVDCRISFKDMVAEVSGLFNIAAGGDVFLKYQLPGRDGLNSLVSLNNDNDLCRMMLKFDRLYSLDPRVSRIRLFVFQIPNKPLNSVKPNSDQLSPNLGKDNGFNSFRADLEGWDSSSWS 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121856g00003 152 SUPERFAMILY CAD & PB1 domains 21 117 - -
Stsc121856g00003 152 SMART PB1_new 18 109 IPR000270 GO:0005515
Stsc121856g00003 152 Pfam PB1 domain 21 110 IPR000270 GO:0005515
Stsc121856g00003 152 PANTHER OS05G0427100 PROTEIN-RELATED 3 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121856g00003 Stsc-Chr121856 14656 15235 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121856g00003 3 114 MAP Kinase Kinase Kinase AT5G57610 36.607 5.61e-16 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121856g00003 - - adu:107464449 152.91