Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121849g00002 ATGGCGGTTACGGCGGTGGCGGCAGCACCAGAAGAAGATGGTGTCAAGGGTAGTGGTGGTGAAGTAGTGGTGGTTGGCATCGAAGAAGAAGAAGAAGTAGTGAATGCAAGAAATTTAAGTGAAGAGAATAATAGTAACAAGGAAAGAGAAGAAGAAGAAGGAGGAGGCGGCGGTGGCGACGAAGGCGGTGATAGGATGAGCTTGGGTGGAAACCGGTGGCCACGGCAAGAAACGTTGGCTCTATTAAAGATAAGGTCAGATATGGATCCAGTGTTTCGTGATTCAACTCTCAAAGGTCCACTTTGGGAAGAAGTTTCAAGG 321 0.4829 MAVTAVAAAPEEDGVKGSGGEVVVVGIEEEEEVVNARNLSEENNSNKEREEEEGGGGGGDEGGDRMSLGGNRWPRQETLALLKIRSDMDPVFRDSTLKGPLWEEVSR 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121849g00002 107 MobiDBLite consensus disorder prediction 33 59 - -
Stsc121849g00002 107 PANTHER FI21293P1 42 106 - -
Stsc121849g00002 107 MobiDBLite consensus disorder prediction 1 20 - -
Stsc121849g00002 107 MobiDBLite consensus disorder prediction 33 71 - -
Stsc121849g00002 107 Coils Coil 33 53 - -
Stsc121849g00002 107 Gene3D - 73 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121849g00002 Stsc-Chr121849 20943 21263 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121849g00002 59 107 Trihelix Transcription Factor Family AT1G76880 73.469 4.70e-18 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc121849g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121849g00002 - - ahf:112802983 104.375