Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121849g00001 ATGGCTTTACTATCCAAGGCTGCAATTTCCAAAGGAATGAACCCTTTTGTTTTTGTTGTTTATAGACAAGCCTTTGCATCAGTTTCCTTATCTCCATTTGCTTTCTTTGACAGCAAGGAGAGTGCTCCCTTGTCATGCAAGTTACTGTGCAAGTTGTTTCTTGTTTCACTTGTTGGGTTGACAACAAGTTCAACACTTTACTATGTTTCAATCAACTACACTTCTGCAACATTTGCTGCAGCCTCCACTAACACTGTCCCAGCTATTACTTTTATCATGGCAGCTTTAATTAGGGTGGAAAGCATTTCCATAAAAGATGTGCATGGAGTTGCTAAGATTTTGGGTTCTGTTCTGAGCCTTTCTGGGGCAATAACATTTGCCTTAGTTAAAGGACCTGCCCTTGATTTCATGAGATGGTATTCACAAAATCAGAACCATTCATCATCATCATCTTCAGTGATTCACTCCAAAGGGGATAATATCAAAGGTGTTCTTATGATGCTCTCAGCAAACACTGCTTGGTCCTTATGGCTTATTTTGCAGGGATTTGTTGTGAAGGAATATCCAGCAAAATTTCGGCTTACAACTGTACAATGTTTCTTTAGCTTCATTCAATCATCTGTTTTGGCTTTATCAGTAGAGAGAAATCCATCAGCATGGAAGCTTGGATGGGATATTCATCTTCTTTCAGTGGCCTACTGTGGTGTAATTGTAACAGGAATTTGTTATTGGCTACAAGTGTGTACAATAGAGACAAAAGGAGCAGTTTTCACAGCAATGTTCACTCCTCTTGCTCTCATAATCACTGCAATGTTATCAGCAATTTTGTGGAAAGAAACACTTTACTGGGGAAGTATTGGTGGCACTATTTTATTGGTTCTTGGATTGTATAGCGTATTGTGGGGGAAGAGCAAGGAGAGTGTAAAAGGGAAGAATCATGAAGATGAAGAAACAAAAGAGGAAAACAGATTGGAGTGCATTATACAGAATTGA 993 0.3897 MALLSKAAISKGMNPFVFVVYRQAFASVSLSPFAFFDSKESAPLSCKLLCKLFLVSLVGLTTSSTLYYVSINYTSATFAAASTNTVPAITFIMAALIRVESISIKDVHGVAKILGSVLSLSGAITFALVKGPALDFMRWYSQNQNHSSSSSSVIHSKGDNIKGVLMMLSANTAWSLWLILQGFVVKEYPAKFRLTTVQCFFSFIQSSVLALSVERNPSAWKLGWDIHLLSVAYCGVIVTGICYWLQVCTIETKGAVFTAMFTPLALIITAMLSAILWKETLYWGSIGGTILLVLGLYSVLWGKSKESVKGKNHEDEETKEENRLECIIQN 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121849g00001 330 Pfam EamA-like transporter family 3 120 IPR000620 GO:0016020
Stsc121849g00001 330 Pfam EamA-like transporter family 162 300 IPR000620 GO:0016020
Stsc121849g00001 330 SUPERFAMILY Multidrug resistance efflux transporter EmrE 224 304 - -
Stsc121849g00001 330 PANTHER WAT1-RELATED PROTEIN 1 314 IPR030184 GO:0016020|GO:0022857
Stsc121849g00001 330 SUPERFAMILY Multidrug resistance efflux transporter EmrE 21 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121849g00001 Stsc-Chr121849 3891 6535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121849g00001 1 306 Nodulin-like Gene Family AT2G39510 39.610 2.18e-76 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121849g00001 - - gmx:100800562 525.783