Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121769g00001 ATGGTAGGAATTCATGGAATGGGCGGGATAGGTAAATCGACTCTTGCCAAGGCAGTTTTTAATTATATAGCTGACCAATTTGACAATCGATGCTTTCTTGAGAACGTGAGTGAAATGTCAAGTAAGCATGGATTGGAACGTCAACAAGAGACGCTTCTTTCTAAAATTGTTGGAGAATTGGATGCCAAATTAGGAGGCATCAGTGAAGGTATTGAACTAATAAAGCGTAGGCTTAAAAAGAAGAAGGTTCTGTTGATTCTGGATGACGTTGACAATGAAAAGCAGTTGAAAGCACTTGCTGGAGAGCTAGATTGGTTTGGTCCTGGTAGCAGAGTTATTATTACGACTCGAGACAAAAAAATACTAAAATGTAAATGGATTGAAGGAAAATACGAGTTAAAGGGGTTAGGTTGGGACGATTCCTGTAAATTGTTTGAGTGGATGGCCCTTGAAAATAAGAAAGTTGATAAGTGTCTTATAAATCGTGCACTAACTTATTGTGCAAACCTTCCATTGGCTTTGGAGGTAATAAGTTCTGATTTGGCTAGTAGAGAGGTACAAGAATGGAAATCTGCATTAGACTATTATGAAAGAAATCTCGACAAAGGATTCTATGATGAACTTAAAAGAAGCTATGATCCTTTGGCAAAAGAAGTGCAAGATGTTTTTCTTGACATTGCTTGTTGCTTTAGAGTGTTCAGTTTGACAGAGGTCATTGACGTGCTACGCGCTCATCATGGCTTCTGCCCAGAGCATCACATTAAAATCTTGGAAGAAAAATCTCTTATAATGATTGAAAATAATCGAGTGAGTTTACATAGCTTAATACATGAAATGAGTAGAAAACTTGACCATGGATACCGCTATTGCTTACGGTCCCATGAAGATATAGATCGACTGTTTGAAGACCATAAGGTTAAGGAAGGTCATCATAAAATTGAAATGATCATTTTAGATCTTTTTAATCAGAATAAAGGAAAGGTCGAATGGAATGGAGAAGCCTTTAAAAATATGAGAAATCTCAAAACACTGATAATTCGACATGCTTGTTTTTCCCGAGGTCCCAAAAGTCTTCCAAATAGTTTGAGAGCACTTGAATGGCGAGAATATACTTCGGAATTTTTACCATTGGATTTTTGCCCCAAATATCTCACCATGTTGAAGTTATCCTATAGTTTCCTAACATCACTCAGGTTTCTGCATAAGGAGTACAGGAATATGAAAGTTTTGAATTTTGATTGTGCTGAATATGTAAGAGTAATACCTGATGTATCATCTATCCAAAGTTTAGAGGAATTATCATTTGCAAAATGTAGGAAGTTGATTGAAGTTGATAATTCAGTTGGAAAGCTGAGAAAGCTTAAGATATTGGACGCCTCTGGTTGTACCAAGCTTAGAAGCTTCCCATCTCTTATGTTGCCATGTCTTGAAAAACTCAATCTCTCATCATGCTCAAGTCTTGAGAATTTTCCAAAATCACTAGAAAAGATGGGAAATTTAGCCAAGCTCGATTTAAGTTCCACTGCCATAAAAGCTATCCCTGCTGCTCTCTTTTATGATGCCCCCAAGTTACAAGAGTTATCCTTTGCAAATTGCCAGAGTTTGAATAAACTTGATAATTCAGTTGGAAAACTGAGTTACCTTAAGATATTGGATGCCTCTGGCTGCAGCAATCTTAAAAGCTTCCCATCTCCTCTTATGTTGCCGTCTCTTGAAAAACTCAATCTCTCCTCATGCTCAAGTCTTGAGAGTTTTCCAGAAATTCCAGGAAGAATGGAAAAAATAACACGGCTCAGATTGCAGAACTCTCCCATAAAAAGATTGCCGAATTCAATTCGAAATCTCACTTGGCTTCAAAGCTTGAAAATGCTTGGTGTTAATATCTCATTTCTTCCTCACTGCATCACAGAATGTGTTCTTTTGAAGCAATTGAATTTGGATCAGTGCCATGATCTTAAAGAAATTAGAAGGCTTCCACCCAACTTGGAAACACTCTCTGTGACATGTTGTAGGTCCTTCAAATATTTAGACCTCTCAATTCTTGGAAGAAATACCAAAGAATATTACAAGTTGAGGAGACTCGTTGTGGATAACTGTGGGAGTCTTCAGAGAATTGACGGAATCCTACCAGGAGCTTTCTCTGCAACAAATTGCATTTGCCTGCCTTCCTCGTATGGAAGCATGCCACTGAATCAGGAACTAGGCGAGGATGGTGGAAGCATGTGGCATTTGATGCCAGGAAACAGGATTCCAGAGTGGTTCCATCGTCGTAATGATGGAGACTCAATCTCTTTTTGGTTTCAAGAAAAGTTTCCTGCCATTTCACTTTGTGTTTTCCTTGGCGGGTTGGGTAAACACCAAATGCCATTTTATTTTTGTCTCAAATTGAAGATCAATGGCAATACCGTACATAGGTGGCTGCTAGAGAACAAGAAGTATTGGTTTGTGCAAAAGCTAGAAGTTGATCATTTATTCATTCTCCATGAAAAGCAAACTAAAGATGAAAATAGGCTGAATAAAGGATTTGTGGGAAATAAAGGATGGAATGGAGCCGAGATTTTTGTTGAGGTTTATTTTCCAGATGGAGAGACAGAAATGGACATGCAAATTGGAATCCATATTCAAAGGAAAAATTAG 2637 0.3792 MVGIHGMGGIGKSTLAKAVFNYIADQFDNRCFLENVSEMSSKHGLERQQETLLSKIVGELDAKLGGISEGIELIKRRLKKKKVLLILDDVDNEKQLKALAGELDWFGPGSRVIITTRDKKILKCKWIEGKYELKGLGWDDSCKLFEWMALENKKVDKCLINRALTYCANLPLALEVISSDLASREVQEWKSALDYYERNLDKGFYDELKRSYDPLAKEVQDVFLDIACCFRVFSLTEVIDVLRAHHGFCPEHHIKILEEKSLIMIENNRVSLHSLIHEMSRKLDHGYRYCLRSHEDIDRLFEDHKVKEGHHKIEMIILDLFNQNKGKVEWNGEAFKNMRNLKTLIIRHACFSRGPKSLPNSLRALEWREYTSEFLPLDFCPKYLTMLKLSYSFLTSLRFLHKEYRNMKVLNFDCAEYVRVIPDVSSIQSLEELSFAKCRKLIEVDNSVGKLRKLKILDASGCTKLRSFPSLMLPCLEKLNLSSCSSLENFPKSLEKMGNLAKLDLSSTAIKAIPAALFYDAPKLQELSFANCQSLNKLDNSVGKLSYLKILDASGCSNLKSFPSPLMLPSLEKLNLSSCSSLESFPEIPGRMEKITRLRLQNSPIKRLPNSIRNLTWLQSLKMLGVNISFLPHCITECVLLKQLNLDQCHDLKEIRRLPPNLETLSVTCCRSFKYLDLSILGRNTKEYYKLRRLVVDNCGSLQRIDGILPGAFSATNCICLPSSYGSMPLNQELGEDGGSMWHLMPGNRIPEWFHRRNDGDSISFWFQEKFPAISLCVFLGGLGKHQMPFYFCLKLKINGNTVHRWLLENKKYWFVQKLEVDHLFILHEKQTKDENRLNKGFVGNKGWNGAEIFVEVYFPDGETEMDMQIGIHIQRKN 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121769g00001 878 Gene3D Ribonuclease Inhibitor 594 720 IPR032675 -
Stsc121769g00001 878 Gene3D Ribonuclease Inhibitor 473 593 IPR032675 -
Stsc121769g00001 878 Gene3D - 136 216 IPR042197 -
Stsc121769g00001 878 Gene3D - 1 128 IPR027417 -
Stsc121769g00001 878 Gene3D Ribonuclease Inhibitor 311 471 IPR032675 -
Stsc121769g00001 878 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 226 IPR027417 -
Stsc121769g00001 878 PRINTS Disease resistance protein signature 167 181 - -
Stsc121769g00001 878 PRINTS Disease resistance protein signature 77 91 - -
Stsc121769g00001 878 PRINTS Disease resistance protein signature 566 582 - -
Stsc121769g00001 878 PRINTS Disease resistance protein signature 1 16 - -
Stsc121769g00001 878 SUPERFAMILY "Winged helix" DNA-binding domain 208 283 IPR036390 -
Stsc121769g00001 878 Pfam NB-ARC domain 1 202 IPR002182 GO:0043531
Stsc121769g00001 878 SUPERFAMILY L domain-like 330 705 - -
Stsc121769g00001 878 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 491 672 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121769g00001 Stsc-Chr121769 2142 5413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121769g00001 520 721 WRKY Transcription Factor Family AT5G45050 26.800 1.24e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121769g00001 - - ahf:112751548 917.531