Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121756g00001 GTTGAGCCAATTCGCAACTTTTTTGCTGCTCTGTTCTTGGCCAGCATTGGGATGCTTATACATGTCCATTTTCTTTGGAATCATGTTGACATCTTATTGGCAGCTGTTATGCTGGTGATCATCGTAAAGACAATTGTAGCTGCATGTGTTGTCAAGGGGTTTGGTTACAACAACAAGACTTCACTTCTTGTTGGGATGTCTTTGGCACAAATTGGGGAGTTCGCCTTTGTTCTTCTCAGTCGTGCTTCAAATCTTCATCTAGTGGAGGGAAAGTTGTATCTATTGCTCCTTGGAACAACAGCTCTCAGTCTGGTGACTACACCTCTGCTTTTCAAGTTAATTCCAGCGGTGGTACATCTTGGTGCTTTGCTGCGGTGGTTCCCTCCTGATAGTCCATCTGAGATTCCCTATAAAGGGGACAGCTTTCGGTCAGACAGTGCTAAGCGTGTTACTTTGTTGGTTCAAGGCTCTCATAATTCATGA 483 0.4431 VEPIRNFFAALFLASIGMLIHVHFLWNHVDILLAAVMLVIIVKTIVAACVVKGFGYNNKTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLLGTTALSLVTTPLLFKLIPAVVHLGALLRWFPPDSPSEIPYKGDSFRSDSAKRVTLLVQGSHNS 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121756g00001 160 Gene3D - 1 119 IPR038770 -
Stsc121756g00001 160 Pfam Sodium/hydrogen exchanger family 1 112 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc121756g00001 160 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 1 151 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121756g00001 Stsc-Chr121756 461 1700 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121756g00001 1 160 Antiporters AT2G19600 81.988 1.00e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121756g00001 K26735 - rcu:8265074 268.855