Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121748g00001 ATGGAAATCAAATCTATATTGATGGATATGATTGAGAAGAAAGAGCGTGCAATGAAAGAGGGAAAACTAGAAGGCCGTGATTTGTTAAGCCTTCTATTAGAATTTAAACATCAGAATAATTCTCTCACGAATGAGGATGTAATTGAGGAGTGCAAGTTGTTCTACTTTGCTGGCCACATCACCACATCCAACCTGCTTGCGTGGACTATGGTATGCTTATCTATGCATCCAATGTGGCAAGAAAAGGCAAGAGACGAGGTGCTACACATGTTTGGCAAAAGAACCCAACTTGATTTTGAAGACATAAATCGCCTCAAGATTGTGCCAATGATATTGAAGGAAGTTTTGAGACTGTATCCACCTCTAGCGGTATTGTATAGATACACTTCATGTGAAACAAAAATAGGGAGCATGACTATTCCGGAAGGTGTTGAGCTTGTTCTACAAGTGTTGCATATTCATCATAATGACAAATATTGGGACAAGGCAGACGAGTTCAATCCAGCTAGGTTTGCTGATGGGATTTCAAATGCTTCTAATGAGGGTCATGCTGCTTTCTATCCATTTGGATGGGGTCCAAGAATCTGCATTGGACAAAACTTTGCATACTTGCAAGCAAAGATGGCTCTCTCTAAGATTCTTCAGAATTTCTCGTTCCAACTCTCACCCTCTTATGCCCATGCTCCAATTAGTTGTGTTACTCTTCAGCCACAGTATGGAGCTCCCGTTATTATCAGTCGTATTTAG 747 0.4056 MEIKSILMDMIEKKERAMKEGKLEGRDLLSLLLEFKHQNNSLTNEDVIEECKLFYFAGHITTSNLLAWTMVCLSMHPMWQEKARDEVLHMFGKRTQLDFEDINRLKIVPMILKEVLRLYPPLAVLYRYTSCETKIGSMTIPEGVELVLQVLHIHHNDKYWDKADEFNPARFADGISNASNEGHAAFYPFGWGPRICIGQNFAYLQAKMALSKILQNFSFQLSPSYAHAPISCVTLQPQYGAPVIISRI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121748g00001 248 SUPERFAMILY Cytochrome P450 3 246 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS P450 superfamily signature 196 207 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS P450 superfamily signature 57 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS P450 superfamily signature 187 196 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS P450 superfamily signature 110 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PANTHER CYTOCHROME P450 FAMILY MEMBER 2 241 - -
Stsc121748g00001 248 Pfam Cytochrome P450 2 230 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS E-class P450 group I signature 46 63 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS E-class P450 group I signature 186 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS E-class P450 group I signature 196 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS E-class P450 group I signature 66 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 PRINTS E-class P450 group I signature 149 173 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121748g00001 248 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 189 198 IPR017972 GO:0005506|GO:0016705
Stsc121748g00001 248 Gene3D Cytochrome P450 1 248 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121748g00001 Stsc-Chr121748 7252 8547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121748g00001 2 244 Cytochrome P450 AT3G14620 51.837 1.78e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121748g00001 - - aip:107623710 327.405