Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121741g00005 ATGGCTTCTCAAACCAAGAATAACAACCATGAGCAAGTGAAGATCATAGAAGAATGTAAAGTTTCACCGCCACAAGGCTCTCTTCCCTCTACCACCACCATTCTCCCCCTCACTTTCTTCGACATTGCATGGTTCCTATCCCATCCAATTAACCGCATCTTCTTCTATGACTTCCCATACTCCACCAACCACTTCCTTCAATCAACACTCCCTCCTCTTAAATACTCCCTCTCCCTCTCCCTCCAACACTTCTTCCCATTCGCCTCCAACCTCATCGTCCCTCCCACCCCAAACCTCCCCTTCATCCGTTTTATACACGGTGTTGACTCACTCTCTCTCACCATTGCAGAGTCTAAAGCAGATTTTTCCTTACTTGTATCTGATTCTCCACAAGATGTTACCCTTTTACACCCTTTCGTCCCTTCTTTGCCTCCTAAGCTTACCTTGGAGGATGGCACACATGTTATGCCTCTCATGGCAATTCAAGTCACTGTTCTACCAAACTCCGGCTTCGCCATTTGCCTAACATTCTGCCATGTCGCTGCAGATGGGAACTCGCTTCATCAGTTCATCAAGTTTTGGGCCAATCTTTGCAAGCAAATAGTGACAAGAGATGGTGGTGGAGAATCTAGTAGCTTTTTATCTCTTCCTTTTCTTGATAGAGGCATAGTTAAGGACCCAAAAGGGCTTAAACACGTTTACATGGAAGGGGTAAGAGATTTGATGAGGAAGAGTAACAACAACGACATGATGAATTCTCATCATCAAGTAGTCCCTATTGAAGACATCATGGTACGTGCAACTCTTGTCCTAAACCATAGCCAAGTTGAGAAACTCAAGAAATTTGTGTCTCTTAAATACCGTGACACCTGTGATTCTAATAATAATACATTATTACACATGTCAACCTTTGTGGTCACGTGTTCCTTGATTTGGGTTTGTATGATGCAATCAGAACAACAAACCCAAGATGATGATGATGATAAGGATTTTGACAAAGTTTGCTGTTTGATAATTCTAGCTGATTACCGTGGCCGTTCTGAATTCTCAATACCTTCAAATTACTTTGGGAATTGCTTACTGTCTGTATATGTGAGAATCAAGAGGGGTGACCTAGTTGGAGAAAATAATAATTATTATGGGATTTTTGAGGCTGCACGTGGAATTGAAAGGGAGATTAGAAATTTGAGAAATGATGCATTAACAACGGTTGAAAGTTTTATCTCAGATACTAGAGCATCAAATGAATGTTACAGTAGAATTGTGGTGGCAGGGTCTCCAAAATTAGGAGTTTATGAAACTGATTTTGGGTGGGGAAAGCCTAAGAAATCTGCAGCAGTTCATGTTGAATCAGCAGGAGCATTTTCTCTTTCTGATTGTAGGAACAATGAAGGTGCAGTTGAGTGTCCAGATTTGGGATCCAAGGATCCAAATCTGAATCCAAAATAA 1449 0.4155 MASQTKNNNHEQVKIIEECKVSPPQGSLPSTTTILPLTFFDIAWFLSHPINRIFFYDFPYSTNHFLQSTLPPLKYSLSLSLQHFFPFASNLIVPPTPNLPFIRFIHGVDSLSLTIAESKADFSLLVSDSPQDVTLLHPFVPSLPPKLTLEDGTHVMPLMAIQVTVLPNSGFAICLTFCHVAADGNSLHQFIKFWANLCKQIVTRDGGGESSSFLSLPFLDRGIVKDPKGLKHVYMEGVRDLMRKSNNNDMMNSHHQVVPIEDIMVRATLVLNHSQVEKLKKFVSLKYRDTCDSNNNTLLHMSTFVVTCSLIWVCMMQSEQQTQDDDDDKDFDKVCCLIILADYRGRSEFSIPSNYFGNCLLSVYVRIKRGDLVGENNNYYGIFEAARGIEREIRNLRNDALTTVESFISDTRASNECYSRIVVAGSPKLGVYETDFGWGKPKKSAAVHVESAGAFSLSDCRNNEGAVECPDLGSKDPNLNPK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121741g00005 482 Gene3D - 262 470 IPR023213 -
Stsc121741g00005 482 Pfam Transferase family 27 468 - -
Stsc121741g00005 482 Gene3D - 8 250 IPR023213 -
Stsc121741g00005 482 PANTHER - 13 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121741g00005 Stsc-Chr121741 18114 20170 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121741g00005 53 441 Monolignol Biosynthesis Gene Families AT5G48930 22.084 7.92e-13 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121741g00005 - - adu:107462106 697.197