Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121741g00003 ATGGAAAAGCTTAGTGAAGACGATGAACATAAATTTGTTGAGCAATCTCAAGTCGCACCAAACAATCCCAAAACCACATCTTTCCCTCTTACATTCCTTGATATATCATTGGCAGGTCCAATCTATGGTAGACGCCAATTCTTCTATAACTTCCCTTACTCCACCCACCATTTCCTCCAAACTACATTCCCATCTCTCAAACGCTCTCTTTCTCTCACCCTTAAACGTTTCTTCCCTCTTGCCGGTAACCTCTTATGTCCTCCCCCACCACATCCTCCCTTTATCCGATGCACCGAGGAAGACTCCGTCGCCTTCACGGTCTTCGAGTCCTCCTCGGATTTCAACCATCTCTCCGGCAACAACCCTAGAATTCTAAAGAGATTGGATCAATTGGTTCCCAAGTTGACCTGCAAAGTAATGCATCATCATCATGATACACTTATTTTTCCAAATTTGGCCTTGCAAGCCACGGTTTTCCCATACCGCGGCGTTTGCATCGCCATTACCTATAATCACATGATAGACGGCACATGTTGCTCTCAGTTTATGAAGTTTTGGTCTTCCCTTTGTACATGTGGAATCGACTCCTCAGTTTTTGAGAAGTTAACTCCACCATGTTTGGATAGGGAAGTACTAAAGGATCCCAAGGAGCTTGGGGCTATTTTCTTGAAAGATTATTTTCAAGAGAGGGAAAATTGGAAGAATAAACTCATCAGAAGAAGTCAAAGTCATCGACCATTCGATTCAACCGTTGCTATGGAAGAGGACCATGTCAGGGTAACTATTGTATTTGATAAACATGACATTGAGAGAATGCAAACCTTCTCACTCAACCAACTGAAGAAAAGATACGGATTAAAATCGCCGCAATATGTATCCAAATTCGTGGTGGCGTGTGGTTTCGCATGGAGTAGCTTGGTTAAAACAAGAGCTATAGAAAGAGATAGCGAGTGTGAAGAAGAAGAAGAGTATTTTTGTTTTGCGGCGGATTGTAGGGGACGATTAGAGTACCCGGTACCGGAAACTTACTTTGGAAACTGCATAACACAATGCAACGTAACGCTGAGAAGAAGTGAGCTGAAGGGTGAAGGTGGTTTTGTGAATGCGGTGAAGGCGATAGATAGGGCGATAAACGACATGAAGAAGGAGCCGTTTGGAGGTTTGGAGAATTGGAAAGAGAGCTTGAGGAAGATGTTTGGGACGGGGAGAGTTTTGGTTGTGGGAGGGTCACCAAAATTTAAGGTTTATGAGAACGATTTTGGTTTTGGAAGGCCTTGTAAAGTGGAAATGGTGCAGTCCCTCAAGGGTTTGTCTATTTCTGAAACTCCAAACAACCAAGGAGGATTCGAGATTGGTGTTGTTTTGAAGAACATGACCCAATCTAAAACCTTTCTCAGTGTCGTTAAACAAGGCCTTAAAGCTTTGAAATAA 1431 0.4305 MEKLSEDDEHKFVEQSQVAPNNPKTTSFPLTFLDISLAGPIYGRRQFFYNFPYSTHHFLQTTFPSLKRSLSLTLKRFFPLAGNLLCPPPPHPPFIRCTEEDSVAFTVFESSSDFNHLSGNNPRILKRLDQLVPKLTCKVMHHHHDTLIFPNLALQATVFPYRGVCIAITYNHMIDGTCCSQFMKFWSSLCTCGIDSSVFEKLTPPCLDREVLKDPKELGAIFLKDYFQERENWKNKLIRRSQSHRPFDSTVAMEEDHVRVTIVFDKHDIERMQTFSLNQLKKRYGLKSPQYVSKFVVACGFAWSSLVKTRAIERDSECEEEEEYFCFAADCRGRLEYPVPETYFGNCITQCNVTLRRSELKGEGGFVNAVKAIDRAINDMKKEPFGGLENWKESLRKMFGTGRVLVVGGSPKFKVYENDFGFGRPCKVEMVQSLKGLSISETPNNQGGFEIGVVLKNMTQSKTFLSVVKQGLKALK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121741g00003 476 MobiDBLite consensus disorder prediction 1 20 - -
Stsc121741g00003 476 Gene3D - 254 474 IPR023213 -
Stsc121741g00003 476 PANTHER - 11 474 - -
Stsc121741g00003 476 Gene3D - 10 238 IPR023213 -
Stsc121741g00003 476 Pfam Transferase family 16 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121741g00003 Stsc-Chr121741 6379 7972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121741g00003 25 457 Monolignol Biosynthesis Gene Families AT5G48930 21.556 2.92e-13 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121741g00003 - - aprc:113855905 541.962