Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121726g00002 ATGTCCAGTGTTGTCAATCCTGTAGGTTGGAGCGACAACATGAACTCTAAATATGATAGTACTGTATTTTTTGGAGAGTACAAAAACACCGGAGCGGGATCAGCTATCGCTGGGCGCGCCAAGTTTACAAAGCAACTAAATGATGCAGATGTAAAACCTTTCCTCAATCTTGGTTTCATTGAAGGCTCCTCATGGATACTTCCTCCTCCAAAAGTCTAA 219 0.4247 MSSVVNPVGWSDNMNSKYDSTVFFGEYKNTGAGSAIAGRAKFTKQLNDADVKPFLNLGFIEGSSWILPPPKV 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121726g00002 72 Gene3D - 1 69 IPR012334 -
Stsc121726g00002 72 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 66 - -
Stsc121726g00002 72 Pfam Pectinesterase 1 62 IPR000070 GO:0030599|GO:0042545
Stsc121726g00002 72 SUPERFAMILY Pectin lyase-like 1 66 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121726g00002 Stsc-Chr121726 12980 13776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121726g00002 1 71 Carbohydrate Esterase AT5G07430 54.930 6.48e-25 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121726g00002 K01051 - jre:108998818 111.694