Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121715g00003 ATGGTTCAAATTCCCACAGGAAGAAGAGATGGGATGGTTTCGCTTGCTTCGAATGTCAGGCCGAACATCGTGGACACGAGTTTTACAATGGATGAAATGGTTAAACTTTTCACATCCAAAGGATTGTCTGTTCTTGATCTTGTCATCCTTTCAGGAGCTCACACCATGGGAGTGGCTCATTGCAATGCATTCAGAGATCGATTCCAAGTAGACGCCGAGGGGCGGCTCACGCTCATTGACAAGACTCTGGACAGTAGCTATGCTGCTGAGCTAATGAAACAGTGTTCAACAAGTGAAATGGCATCTACAACAGTGAACAATGATCCTGAAACACCTATGGTCTTTGACAACCAGTACTACCTGAACCTTTTGGCGCACAAAGGGCTTTTCCAGTCAGATTCTGCATTGCTGAATGAAAACAGCACAAGAACAATGGTGGAGGATTTTGCAAATGATCAAGAACTTTTCTTTGAAAACTGGGGCCAGGCTTTCTTGAAGCTCACAAGTGTTGGAGTGAAATTAGAGAATGAGGGTGAAATTAGACGTTCTTGTGCATCAACTAATAATGCATAA 573 0.4346 MVQIPTGRRDGMVSLASNVRPNIVDTSFTMDEMVKLFTSKGLSVLDLVILSGAHTMGVAHCNAFRDRFQVDAEGRLTLIDKTLDSSYAAELMKQCSTSEMASTTVNNDPETPMVFDNQYYLNLLAHKGLFQSDSALLNENSTRTMVEDFANDQELFFENWGQAFLKLTSVGVKLENEGEIRRSCASTNNA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121715g00003 190 SUPERFAMILY Heme-dependent peroxidases 2 188 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 Gene3D Peroxidase, domain 2 24 167 - -
Stsc121715g00003 190 ProSiteProfiles Plant heme peroxidase family profile. 1 188 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 PANTHER - 3 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 ProSitePatterns Peroxidases proximal heme-ligand signature. 46 56 IPR019793 -
Stsc121715g00003 190 Gene3D - 3 188 - -
Stsc121715g00003 190 Pfam Peroxidase 2 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 PRINTS Haem peroxidase superfamily signature 108 123 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 PRINTS Haem peroxidase superfamily signature 46 61 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 FunFam Peroxidase 24 167 - -
Stsc121715g00003 190 PRINTS Plant peroxidase signature 45 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 PRINTS Plant peroxidase signature 106 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc121715g00003 190 PRINTS Plant peroxidase signature 122 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121715g00003 Stsc-Chr121715 9713 10587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121715g00003 1 188 Peroxidase AT4G31760 62.234 6.89e-86 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121715g00003 K00430 K18328 gmx:100803223 292.737