Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121707g00001 ATGACAGCAGGTCCTGAAGCCGAGGATGGAAATAAACAAACACACGAGGAGGAGTATATTCCGAAGGTTGGAATGACATTTCAAACACTTGCTGAGGTTGGTTTGTTCTACAAAGAGTATGCCAAACATGCAGGGTTCTCTACTAAAATAAGAAACACAAATAGATGTAAGGAGACAAAGGAAGAAATGAATCAACTCATAACATGTAGCAGAGAAGGAAAATGGACATCCAAAGTACCTTACGTTGAGAAGACGAATCCTATCTGTGGTGCAAACTGTCCTGTACGAATTTATGCTCACGCAGTAAAGATAACTCGAATGTGGCGCATTTCAAAAGTAGTTCTTCGTCAGTCACATCCATGCTTCCCAGAGCAAGCTCAGATGTTAGCACAACACAGGAAGCTTAGCTTGGATGTTTGA 420 0.4143 MTAGPEAEDGNKQTHEEEYIPKVGMTFQTLAEVGLFYKEYAKHAGFSTKIRNTNRCKETKEEMNQLITCSREGKWTSKVPYVEKTNPICGANCPVRIYAHAVKITRMWRISKVVLRQSHPCFPEQAQMLAQHRKLSLDV 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121707g00001 139 Pfam FAR1 DNA-binding domain 36 122 IPR004330 -
Stsc121707g00001 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121707g00001 Stsc-Chr121707 4057 4681 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Stsc121707g00001 FAR1 2.5e-10 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121707g00001 - - adu:110280446 155.606