Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121704g00004 ATGCAGATGCTTATTATCATCTCTTTGTGGTTGCTAACAGCTTTGCCGCTGTCATGCTTCTCTCAAGTTTGTAGCCGGCAGCCATACAAGTGTGGAGGACTACCTGAACTTTACTACCCATTTTGGGGGCAAACCCGGCCCCCTTACTGCGGCGGAGGCCACCAGTTCAACCTTACCTGCTACGCCTCTAATCGCACTTCCATTTCAATGCCATCACAAGAATTCGAGGTGGTGGACATTGACACCCAAGCTCACACCATGACGATGGTGCCCCTAGAATACGATGTTTGCTCTCCCCACTTCGACTTTTCCCTCAGCCCCCTCTTCTGGTACGCCAGCACTGTCATCAACATCACCGTTTTCTACGATTGCCCCTCGGAGGCGTTAGTTTCTTCTTTGAACAACTTTACGTGCGGATCAGATGATGGCGTCTACTATCTGGGTGGGGAAGATGAGTTGCTGCAACAGAATCTAGAGCTGGGGAAATGCCGGAGGCGAAGGCAAGTGCCGGTAGACGAGAATGCTCCTTCACCTGATGGTGGTGGAGTTAATTCTCTGTATGCAGCTTTACAAATGGGGTTTCAGGTCAACTATGTTGTTTCTGAGGAATGCATGACATGCTTGGCAAATCATGGTCTTTGCGGGATGATTCAGGATCGTTTTATCTGCTCTCAATCTCAATCTCATCACGAAAGTGTTACAGGTAGTGTGGTTGGATTGATATTAATTTGCATCACTTTTTGGCGCTTGTTGACATTATTCAAGTCATCAAGATGGCAAGAAATACTTTGGTTAAGGACCAAGAGGAACCAAGATATTGAGGCCTTCTTAAAAAGTCATGGATCTCTAACATTAAAGAGATATAAATTCTCAGAATTGAAGAGACTCACCAACTCCTTCAAATTTAAATTGGGTAAAGGTGGTTTTGGTGTTGTATACAAAGGAATGTTACCCAACGGATCCCCAGTGGCTATAAAGATTTTGAACCCATCCAAAGGAAACAATGAAGAATTTATTAACGAGGTAGCTAGCATCAGTAAAACTTCTCATATTAATGTCGTCACTCTTCTCGGATTCTGTTCGGAAGGTCAAAGAAAAGCTCTCGTTTATGAATTTATGTCCAATGGTTCTCTTGACAAGTTCATTAGCGATAATAATAAACCACAAACCGCTCCATGGTTAAGTTGGAGCAAATTGTATGAAATTGCAATAGGGATAGCTAAAGGGTTGGAGTACTTGCATAAAGGATGCAATACTCGAATCTTACATCTTGACATAAAACCACATAATATTCTTTTGGACGAAAAGTTTTGTCCTAAGATATCAGATTTCGGACTATCAAAATTGTGCCTGAAAAAAGAGAGTATTATTTCTATATCAAATGCTCGAGGAACAATAGGATACATAGCTCCAGAAGTACTGAATAGAAATTTCGGCGGAATTTCTTACAAGTCTGATGTCTATAGTTATGGAATGATGTTACTAGAAATAGTTGGAGGGAGAAAGAAGAACGAGAATGCAGAAGCAAGTCAGTCAAGTAGTGAATATTTTCCAGACTGGATATATAGAAGGCTTGAGGAAGAAGGAACAACTCATGGGGAGGTAGCCACGGAAGAAAATGGGATCGTTAGAAGAATGACTATGGTAGGTTTATGGTGCATTCAAGCTATGCCTTGTGATAGACCGACAATGAATAGAGTGTTAGATATGTTGGAAGGCAACATCAATACCATAGGAATGCCTCCAAAGCCTGTTGTGTCTTCTCCGGTTAGATCACTTATAGAATCAGCTTCAACTATTAACTAA 1806 0.4181 MQMLIIISLWLLTALPLSCFSQVCSRQPYKCGGLPELYYPFWGQTRPPYCGGGHQFNLTCYASNRTSISMPSQEFEVVDIDTQAHTMTMVPLEYDVCSPHFDFSLSPLFWYASTVINITVFYDCPSEALVSSLNNFTCGSDDGVYYLGGEDELLQQNLELGKCRRRRQVPVDENAPSPDGGGVNSLYAALQMGFQVNYVVSEECMTCLANHGLCGMIQDRFICSQSQSHHESVTGSVVGLILICITFWRLLTLFKSSRWQEILWLRTKRNQDIEAFLKSHGSLTLKRYKFSELKRLTNSFKFKLGKGGFGVVYKGMLPNGSPVAIKILNPSKGNNEEFINEVASISKTSHINVVTLLGFCSEGQRKALVYEFMSNGSLDKFISDNNKPQTAPWLSWSKLYEIAIGIAKGLEYLHKGCNTRILHLDIKPHNILLDEKFCPKISDFGLSKLCLKKESIISISNARGTIGYIAPEVLNRNFGGISYKSDVYSYGMMLLEIVGGRKKNENAEASQSSSEYFPDWIYRRLEEEGTTHGEVATEENGIVRRMTMVGLWCIQAMPCDRPTMNRVLDMLEGNINTIGMPPKPVVSSPVRSLIESASTIN 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121704g00004 601 Pfam Wall-associated receptor kinase C-terminal 155 224 IPR032872 -
Stsc121704g00004 601 Gene3D Transferase(Phosphotransferase) domain 1 373 579 - -
Stsc121704g00004 601 ProSiteProfiles Protein kinase domain profile. 298 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121704g00004 601 ProSitePatterns Protein kinases ATP-binding region signature. 304 326 IPR017441 GO:0005524
Stsc121704g00004 601 SMART serkin_6 298 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121704g00004 601 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Stsc121704g00004 601 Pfam Protein tyrosine and serine/threonine kinase 301 570 IPR001245 GO:0004672|GO:0006468
Stsc121704g00004 601 Pfam Wall-associated receptor kinase galacturonan-binding 24 90 IPR025287 GO:0030247
Stsc121704g00004 601 FunFam PR5-like receptor kinase 373 582 - -
Stsc121704g00004 601 PANTHER RUST RESISTANCE KINASE LR10-RELATED 265 588 IPR045874 GO:0004672
Stsc121704g00004 601 SUPERFAMILY Protein kinase-like (PK-like) 280 572 IPR011009 -
Stsc121704g00004 601 FunFam S-receptor-like serine/threonine-protein kinase 267 372 - -
Stsc121704g00004 601 Gene3D Phosphorylase Kinase; domain 1 262 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121704g00004 Stsc-Chr121704 16640 19456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121704g00004 9 598 Receptor kinase-like Gene Family AT1G66910 39.144 1.97e-139 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Stsc121704g00004 PK_Tyr_Ser-Thr 5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121704g00004 - - adu:107490378 938.717