Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121701g00002 ATGAAGAATTTATCAAAGAGAAAGATTGATGAAGTAAGCATGTCTATTGAAAATGAATCCAACTTTCCAATTCAACTTCACAATTCAATTAAGCACAACATAAGTGAGGTTCCCGTGACTTCAATTTTTGTTGTTCAACAAGAACAAGATGCTGAGAGTATCAAAAGATCAATCTTAAATCAAGTTTCAGCACAAAAAAACAGAATCAAGAAAGAACTATATGTGGTGATTTTAGAAGGAAAATTAAAAGCTTTAGAGGAAGAGATAGCTACCCTTGTTCAAAATATTGATGCTCTCAAACATGAGAATCCTTCATTGTTGCTCGAGCAGAAAAAACTGAAATTACAAATGGCTAATATCGAAAGAGAAAACACACTGCAAGAAATGGAGGTGGAGAAGATTATTGTGGAGAAGATGAAGCAGGCCGAACTCCAAAGAGAAGAAGCAATGGAAAACCAACTAAGGTTGCTGAAAAATATTGGCACTAATATTCAGCTTATGTACGAAGCAAATTTAGATCCTTTTGACCATCCACATTGTCTTTTCTCAAACCCGAATCAAGTGCCAAATGGATCAGTAGCACCCTCAGGAACTAATAACGGAGGAGTGAGAATTGAGAGCCAAGCAGGGAAGGTAAATTTGACCAATAATAATGGACAAAGTTTAACTCCAAATTATTATGACTTTGTGAAGAGAGAACCCAATGACTATTGA 714 0.3543 MKNLSKRKIDEVSMSIENESNFPIQLHNSIKHNISEVPVTSIFVVQQEQDAESIKRSILNQVSAQKNRIKKELYVVILEGKLKALEEEIATLVQNIDALKHENPSLLLEQKKLKLQMANIERENTLQEMEVEKIIVEKMKQAELQREEAMENQLRLLKNIGTNIQLMYEANLDPFDHPHCLFSNPNQVPNGSVAPSGTNNGGVRIESQAGKVNLTNNNGQSLTPNYYDFVKREPNDY 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121701g00002 237 SUPERFAMILY Leucine zipper domain 54 106 IPR046347 GO:0003700|GO:0006355
Stsc121701g00002 237 Coils Coil 108 130 - -
Stsc121701g00002 237 Coils Coil 132 159 - -
Stsc121701g00002 237 Pfam bZIP transcription factor 54 109 IPR004827 GO:0003700|GO:0006355
Stsc121701g00002 237 PANTHER BASIC LEUCINE ZIPPER 34 46 145 - -
Stsc121701g00002 237 Coils Coil 75 102 - -
Stsc121701g00002 237 Gene3D - 53 118 - -
Stsc121701g00002 237 SMART brlzneu 48 112 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121701g00002 Stsc-Chr121701 19113 21286 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc121701g00002 bZIP_1 1.1e-07 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121701g00002 - K11499 adu:110277984 242.662