Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121696g00001 ATGGCTAGCGCCGGTGCACCGCCACCGCCACCAGCGGCAGCGTTTAACGAATCAGACAGATCAATGATTTGCTACACACCAACGATGACAACCACAAACGGTGTATGGCAGAGTAACCCTTTACGTTACGCCCTCCCTCTCTTCGTCGTCCAGCTAACCCTAGTTGTTCTCGCCACACGTCTCTTCTATTTCATCCTCAGACCCTTCCACCAACCCCGCCTCATCGCTGAGATCTTGGGTGGATTGTTGTTAGGGCCATCGGTGCTAGGTCAAATCGACGGTTTCGCAATTAGGGTTTTCCCTTTGAGAAGTGTGTTGGTGCTTGAGACTATGGCTTACATTGGCCTCATTTACTTCATGTTCCTCATAGGCTTAGAGATGGACATCGACATCATCAAGCGCACCGGCAAGAAGGCCATCTCCATAGCCATTGCTGGCATGGTTTTCCCCTTCTTGGTGGGTTTCGCTCTCGCACACGTCTTCCAAATCCACCACACCATCAAGGAAGTAAGAACAACTCATATCAGCTACATCATATACCTTGGTGTTGTGCTTTCTGTCACTGCCTTCCCTGTGCTTGTTAGAATGCTAGCTGATCTTAAGCTTGTTAACACGGAGCTAGGCAAGCTTGCAATCTCAACTTCTTTGATTAATGACACCTGTGCTTGGGTTTTGTTAGCTGTAGGCATTGCCTTCTCACAGAGGAAAGCTCATTCTTATTCCTCTCTCTGTGTTTTCTTGTCAAGCCTTGTGTTTGTTGCTGTTTGCATTTTTGTTGTTAGGCCTATGGTGTCATGGATGATACGCAGAACACCAGAGGGACAACCCTTCAGTGAAACACAGATATGCATTGTTCTTACTGGGGTTATAATCTCAGGGTTTATCACTGATGCTCTTGGGACACATTCTGTTTTTGGTGCATTTGTCTATGGTTTGGTTATTCCAAATGGACCACTTGCTGCTTCTATCATTGACAAGCTTGAGGACTTTGTTTCTGGCCTTCTTTTGCCTCTCTTCTTTGCTATCAGTGGCCTCAAGACTAATCTCACCTTGATCAAGGGAGCTGCTAGATGGGGATTTGTCATCTTGGTCATTCCTCTTACTTTTTTTGGCAAGGTCCTTGGGACTCTTTTTGTTTCTCTCCTATTCCAAGTACCCGTCAGGGAAGGTGTCATTCTTGGTCTGCTTATGAATACTAAAGGCTTCATTGAAATTATTGTTCTCAATGTTGGCTGGGACCAAAAGGTATTGGGAGAAGAAGTGTTTTCAATCATGATTCTGGTAACGATTGTAATGACAGCAATAATCTCACCCACAGTGGCATTGATCCACAAGCCAAGAAAAAGGCACATATCATACAAGAACAGAACAATGCAAAGCACAGCAGTAGATGCAGAGCTAAGGATCCTTGTTTGCATTCACGTCCCTAGAAATGTCCCAACCATAATCAACCTCCTGGAAGAAACCAATCCTACAATAAAATCCCCCATCACCGCAAACGTCCTCCACCTGGTTGAACTCACGGGAAGAGCCTCCGCCATGCTGGTAGTCCACGCCGACAGCATCCGCGACAGAAAATCAGGGCGCCCCCTCAACAAGACACATGCACAAACAGAGCATATCATGTCAGCATTCCGTAACTTCGAAGAAAACGTGGCCTGCGTGTCAGTGCAGCCATTGACTGTGGTCTCCCCTTACCCCACCATGCATGAAGACATATGCAGCATTGCAGAAGAGCAAAGAGTGTCATTCATCATCATCCCTTTCCACAAACAACAAACTGTTGCCGGAGAGATGGAAGAAACCATCCCTGCTTATAGGCTGGTGAACCACAACCTCCTCCAAGAGGCTCCCTGCTCTGTTGGGATCCTCGTGGATCGAGGCCTCAACGGATCCACAAGATTAGCCGCCAAGCCCACGTATCATCAGGTGACTGTCTTGTTCTTCGGAGGACCCGATGACAGAGAGGCTCTTTCCTATGGCTGGAGAATGTCAAGACACCCCAGGGTTCGCCTCACTGTCATGCATTTCGTTAATAGGAAGCATAACGAAGAAGAAGATAATGGTGGAGAGAATTATAGCAACGAGAACAAGTGTTTAGATGAAGAGATTATGTACGAGGTGGAGATGATAGCAGAACATGATGATTCGGTTGAGTACTTGGAAAGAGTTGTGGGGAATGGGGAGGAGACAATAGGGGCAATAAGGGCAATGAAGAGTGTGAATGATTTGTTCATAGTTGGAAGAGGGCAAGGGACGACATCACCATTAACAGAAGGGTTGACGGATTGGAGTGAGTGTCCGGAGTTGGGTGCCATTGGGGACTTGTTAGCTTCTTCAGACTTTGAAACATCTGCATCTGTGCTTGTGGTGAACCAGTATGTTGAGGAACGTCCGGATGGAGAAGAGGTCATCATCACTGAAAAGCCATGGCTTGCAACTGATGATGACTTCTACCAGACCTTGATGGCCAGACGTATGTCAAGAAGACACAGATTCGAATCATCACCACCAGCTATGTATTGA 2526 0.4687 MASAGAPPPPPAAAFNESDRSMICYTPTMTTTNGVWQSNPLRYALPLFVVQLTLVVLATRLFYFILRPFHQPRLIAEILGGLLLGPSVLGQIDGFAIRVFPLRSVLVLETMAYIGLIYFMFLIGLEMDIDIIKRTGKKAISIAIAGMVFPFLVGFALAHVFQIHHTIKEVRTTHISYIIYLGVVLSVTAFPVLVRMLADLKLVNTELGKLAISTSLINDTCAWVLLAVGIAFSQRKAHSYSSLCVFLSSLVFVAVCIFVVRPMVSWMIRRTPEGQPFSETQICIVLTGVIISGFITDALGTHSVFGAFVYGLVIPNGPLAASIIDKLEDFVSGLLLPLFFAISGLKTNLTLIKGAARWGFVILVIPLTFFGKVLGTLFVSLLFQVPVREGVILGLLMNTKGFIEIIVLNVGWDQKVLGEEVFSIMILVTIVMTAIISPTVALIHKPRKRHISYKNRTMQSTAVDAELRILVCIHVPRNVPTIINLLEETNPTIKSPITANVLHLVELTGRASAMLVVHADSIRDRKSGRPLNKTHAQTEHIMSAFRNFEENVACVSVQPLTVVSPYPTMHEDICSIAEEQRVSFIIIPFHKQQTVAGEMEETIPAYRLVNHNLLQEAPCSVGILVDRGLNGSTRLAAKPTYHQVTVLFFGGPDDREALSYGWRMSRHPRVRLTVMHFVNRKHNEEEDNGGENYSNENKCLDEEIMYEVEMIAEHDDSVEYLERVVGNGEETIGAIRAMKSVNDLFIVGRGQGTTSPLTEGLTDWSECPELGAIGDLLASSDFETSASVLVVNQYVEERPDGEEVIITEKPWLATDDDFYQTLMARRMSRRHRFESSPPAMY 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121696g00001 841 PANTHER CATION/H + ANTIPORTER 23 795 - -
Stsc121696g00001 841 Pfam Sodium/hydrogen exchanger family 54 441 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Stsc121696g00001 841 Gene3D - 47 452 IPR038770 -
Stsc121696g00001 841 FunFam Cation/H(+) antiporter 15 47 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121696g00001 Stsc-Chr121696 2532 5419 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121696g00001 18 810 Antiporter Super Family AT2G13620 60.272 0.0 956
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121696g00001 K26731 - gmx:100800514 1067.76