Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121676g00003 ATGGACGCCGTCGTTGCTGGGAACTCCGCCTCCGTCGCCGGAGTTTCAAAAGAGAGAGATCGAGGTAGAGAGGGAGGATCGAAGAGAGAGAGACGCGACGCGACGGGAAGAGGAATAAGGTTCCGCCGGCCCTGCAACTCCGATCGACTACCGTTTCTCCGACGCGATTCCACCGTCGCTGTTGATGGTGGAGGCGTCGCCGATGGAGACTCCTCGGTGGCATACAAAGCGAATGTTATATGGCCTAACAAACACCAATCTGAGCCAGAGAAGTTTTATAAAAATCATCTTCTTGAGAGTGAGACATACATAGGTGGCCATGTAGAATGCCTAGAAAGTTGTGTTTTCAGATCTGATATTCCAACTAGTTTTACACCGGAGTCATCTGCTTATGAG 396 0.5076 MDAVVAGNSASVAGVSKERDRGREGGSKRERRDATGRGIRFRRPCNSDRLPFLRRDSTVAVDGGGVADGDSSVAYKANVIWPNKHQSEPEKFYKNHLLESETYIGGHVECLESCVFRSDIPTSFTPESSAYE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121676g00003 132 MobiDBLite consensus disorder prediction 1 42 - -
Stsc121676g00003 132 MobiDBLite consensus disorder prediction 16 42 - -
Stsc121676g00003 132 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 74 132 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121676g00003 Stsc-Chr121676 25031 25595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121676g00003 74 132 Core DNA Replication Machinery Family AT1G08260 79.661 9.97e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121676g00003 K02324 - fve:101291492 108.227