Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121676g00001 ATGGCAGGAGAATTAGGAGTTCTTAACGCACTCGATGCGGCAAAAACACAATGGTACCACTTCACTGCAATTGTCATAGCTGGAATGGGATTCTTCACCGATGCCTATGACCTCTTCAGCATCTCTCTCGTCACAAAGCTTCTTGGAAGAATATATTACACAGATATAAAGAACGACAAGCCAGGGTCCCTCCCGCCAAATATCCAGTCCGCCGTCACCGGCGTTGCACTCTGCGGCACGCTCGCCGGCCAACTATTCTTCGGCTGGCTCGGCGACAAACTCGGAAGAAAAAAGGTCTACGGCTTGACACTCATGCTCATGGTGGTTTGCTCCATCGCGTCCGGCCTCTCCTTCGGAAACAGCCCCAACGGTGTTATGGCAACACTTTGTTTCTTTAGATTCTGGCTCGGTTTCGGTATCGGCGGCGATTACCCTCTCTCCGCCACAATCATGTCGGAATACGCTAACAAGAAGACAAGAGGGGCCTTTATTGCGGCGGTTTTTGCCATGCAAGGGTTCGGAATCTTGACGGGTGGAATCGTTGCACTGATCGTTTCCGTTTCCTTTGATCACAAATACAATGCTCCTAGCTATGCAGAAAATCGAGAGGCTTCTTTGGTGCTCCCTGCATTTGACTACGTTTGGAGAATTATTCTGATGTTTGGAGCAGTTCCGGCGGGGCTTACATACTACTGGCGGATGAAGATGCCGGAAACGGCTCGGTACACGGCGCTTGTTGCGAAGAATGGCACGAAAGCGGCGGCGGACATGTCGAAGGTGTTGAATGTTGAGCTTGAATCGGAGGAGGAGAAGGTGCAGAAAGTGGCGAACGCTGAGAAGAACCAGTTTGGGTTGTTTAGCGGGGAATTCATGAAGAGGCATGGGCTTCATTTAGTTGGAACAACGACGACTTGGTTCCTTTTGGACATTGCATTCTATAGTCAGAACCTTTTCCAGAAGGATATTTTCAGTGCTATTGGATGGATCCCACCTGCACAGGATATGAGTGCAATCCATGAGGTTTATAGAATTGCAAAAGCTCAAACTCTTATAGCACTCTGCAGTACTGTGCCAGGTTACTGGTTCACCGTGGCATTCATCGATTACATGGGCCGTTTCGCAATCCAACTGATGGGTTTCTTCTTCATGACTGTCTTCATGTTTGCTTTGGCTATACCATATGATCACTGGAAACATCATAACAAAATCGGTTTTGTTGTCATGTACTCATTCACTTTCTTCTTCTCCAATTTCGGCCCCAACGCGACCACATTCGTCGTGCCGGCCGAAATCTTCCCGGCAAGGTTAAGGTCAACATGTCATGGAATCTCAGCTGCGGCCGGAAAAGCCGGCGCAATTGTGGGTGCATTTGGGTTCTTATATGCAGCACAAAGCAAGCACAGAGCAGAAGTTGAACCAGGATATCCACCTGGTATTGGGATCAAGAACTCTCTGATTATGCTTGGTGTGATCAACTTCTTAGGAATGTTGTTCACCTTCCTTGTTCCGGAATCGAAAGGGAAATCGTTGGAGGAGTTGAGTGGGGAGAATGAAGAAGAGTATGCTAATGCCAAAGGAGAGACAATTCCAGTTTAA 1596 0.4818 MAGELGVLNALDAAKTQWYHFTAIVIAGMGFFTDAYDLFSISLVTKLLGRIYYTDIKNDKPGSLPPNIQSAVTGVALCGTLAGQLFFGWLGDKLGRKKVYGLTLMLMVVCSIASGLSFGNSPNGVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILTGGIVALIVSVSFDHKYNAPSYAENREASLVLPAFDYVWRIILMFGAVPAGLTYYWRMKMPETARYTALVAKNGTKAAADMSKVLNVELESEEEKVQKVANAEKNQFGLFSGEFMKRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQDMSAIHEVYRIAKAQTLIALCSTVPGYWFTVAFIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWKHHNKIGFVVMYSFTFFFSNFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKHRAEVEPGYPPGIGIKNSLIMLGVINFLGMLFTFLVPESKGKSLEELSGENEEEYANAKGETIPV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121676g00001 531 Coils Coil 262 282 - -
Stsc121676g00001 531 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Stsc121676g00001 531 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Stsc121676g00001 531 MobiDBLite consensus disorder prediction 512 531 - -
Stsc121676g00001 531 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
Stsc121676g00001 531 Gene3D MFS general substrate transporter like domains 19 531 IPR036259 -
Stsc121676g00001 531 CDD MFS_PhT 24 506 - -
Stsc121676g00001 531 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
Stsc121676g00001 531 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Stsc121676g00001 531 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121676g00001 Stsc-Chr121676 18981 21140 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121676g00001 1 520 Inorganic Solute Cotransporters AT3G54700 78.544 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121676g00001 K08176 - gmx:100792177 906.36