Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc121673g00002 | ATGAGTCGAGAGCAACAGAAGGGGGGAGGGAAGCAAGTCAAAGGCTCCGATGGTGCCGAGAAGGTTATCGTTGCCGTTAAGGCGTCGAAAGAAATTCCGAGGACTGCACTTGTTTGGTCCCTCACTCATGTTGTTCAACCTGGAGATTGCATCACCCTGCTAGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGATTGTGCCAGTATCAGCAAAAAGTATCCTCCAGGAACAGTTTCAGAGCAGAAGCATGATATCACTGATTCTTGTTCTCAAATGATCCTTCAGCTCCATGACGTGTATGATCCGAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCTCCTTGTGGAGCAGTGGCCACAGAAGCCAAGAAAGCGCAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAAGAAAAGAGATGCATGGAAGAGCTACAGTGTAATATTGTGGTCATGAAGCGTTCCCAACCAAAAGTACTTCGCTTGAATTTGATTGGATCACAAAAGGAAGCGGAAGAGTCACGTCCATTGCTTTCTGAGCACAATGAGCTGGCTGAAAATCGAACCGAAAAGAATGCCGATTCATTAAATTCCATTAAGGGGCCATCTGTAACTCCAACTAGCAGCCCGGAGCAAGGGACTCCGTTTACTGCAACGGAAGCTGGAACTTCATCAGTTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTATCTCAGAGACAAATGGTGAGTTGAAGAAAGAGGAGACTATCAAAGAAAATCAAGAACTTGATGATTCAGACACAGAAAGTGAAAGTTTGTCCACATCTTCAGCAAGCTTAAGATTTCAGCCATGGATCACAGAATTACTTTTACATCAACAATCCTCTCAACGAAATGAAGAAAGGCAGGAAATATCTCATGATATGCCTCAAACATCTACAACGAGAGCCTTGCTAGAAAAGTTCTCAAGGCTCGATCGAGGAACAGGAAATGAAATGCCAACTTATAGAAATGAGTCAGATTTTAGTGGAAATCTCAGAGAGGCAATATCATTATCCAGAAATACGCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTCTTCGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTAGAACTTGCTACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTCGGATCTGTTCATAGAGGGATTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTATGAGTACATATGCAATGGATCATTGGATTCGCATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAGATTGCCATTGGAGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAAAAAGCTGATGTTTATTCATTTGGGGTGGTATTAGTGGAGCTTGTTACAGGGAGAAAAGCCGTGGATCTCACTCGGCCTAAGGGACAGCAATGTCTTACTGAGTGGGCTCGACCTCTGTTGGAAGAATATGCCATCGAGGAACTGATTGACCCAAGGCTGGGGAGCCGATACATAGAAAATGAGGTCTATTGCATGTTGCACGCTGCAGCATTATGCATTCGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGGATACTAGACGGTGACATGGTCATGGACACAAGTTACATTTCAACTCCGAGTTATGATGCGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCATCATTACAGTGGCCCGCTGTTAGAAGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATACAGGCCTCCTTATTGGGATAGGGACAACAAAGCAAGAAGGACTTCATGTGAAGATGACATTTGA | 2247 | 0.4517 | MSREQQKGGGKQVKGSDGAEKVIVAVKASKEIPRTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASISKKYPPGTVSEQKHDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVATEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGSQKEAEESRPLLSEHNELAENRTEKNADSLNSIKGPSVTPTSSPEQGTPFTATEAGTSSVSSSDPGTSPFFISETNGELKKEETIKENQELDDSDTESESLSTSSASLRFQPWITELLLHQQSSQRNEERQEISHDMPQTSTTRALLEKFSRLDRGTGNEMPTYRNESDFSGNLREAISLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSEANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGSRYIENEVYCMLHAAALCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDAGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYRPPYWDRDNKARRTSCEDDI | 748 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc121673g00002 | 748 | MobiDBLite | consensus disorder prediction | 301 | 321 | - | - | |
Stsc121673g00002 | 748 | MobiDBLite | consensus disorder prediction | 201 | 284 | - | - | |
Stsc121673g00002 | 748 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 477 | 680 | - | - | |
Stsc121673g00002 | 748 | SUPERFAMILY | Protein kinase-like (PK-like) | 385 | 682 | IPR011009 | - | |
Stsc121673g00002 | 748 | FunFam | Dual-specific kinase DSK1-like | 13 | 167 | - | - | |
Stsc121673g00002 | 748 | ProSiteProfiles | Protein kinase domain profile. | 401 | 682 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Stsc121673g00002 | 748 | Gene3D | Transferase(Phosphotransferase) domain 1 | 477 | 682 | - | - | |
Stsc121673g00002 | 748 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 522 | 534 | IPR008266 | GO:0004672|GO:0006468 | |
Stsc121673g00002 | 748 | CDD | STKc_IRAK | 407 | 673 | - | - | |
Stsc121673g00002 | 748 | MobiDBLite | consensus disorder prediction | 205 | 254 | - | - | |
Stsc121673g00002 | 748 | PANTHER | OS01G0750732 PROTEIN | 159 | 679 | - | - | |
Stsc121673g00002 | 748 | FunFam | Adenine nucleotide alpha hydrolase-like domain kinase | 373 | 476 | - | - | |
Stsc121673g00002 | 748 | Pfam | Protein tyrosine and serine/threonine kinase | 406 | 670 | IPR001245 | GO:0004672|GO:0006468 | |
Stsc121673g00002 | 748 | Gene3D | Phosphorylase Kinase; domain 1 | 373 | 476 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc121673g00002 | Stsc-Chr121673 | 13554 | 18033 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc121673g00002 | 381 | 690 | Trihelix Transcription Factor Family | AT1G70460 | 52.500 | 2.12e-104 | 333 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_PERK-2 | Stsc121673g00002 | PK_Tyr_Ser-Thr | 1.3e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc121673g00002 | - | - | gmx:100816340 | 1314.29 |