Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121673g00002 ATGAGTCGAGAGCAACAGAAGGGGGGAGGGAAGCAAGTCAAAGGCTCCGATGGTGCCGAGAAGGTTATCGTTGCCGTTAAGGCGTCGAAAGAAATTCCGAGGACTGCACTTGTTTGGTCCCTCACTCATGTTGTTCAACCTGGAGATTGCATCACCCTGCTAGTGGTTGTGCCTTCACAAAGTTCAGGCAGAAGATTATGGGGTTTTCCTAGATTTGCTGGTGATTGTGCCAGTATCAGCAAAAAGTATCCTCCAGGAACAGTTTCAGAGCAGAAGCATGATATCACTGATTCTTGTTCTCAAATGATCCTTCAGCTCCATGACGTGTATGATCCGAATAAGATAAATGTCAGGATTAAAATTGTTTCTGGATCTCCTTGTGGAGCAGTGGCCACAGAAGCCAAGAAAGCGCAAGCCAATTGGGTTGTATTAGACAAACAGCTCAAACATGAAGAAAAGAGATGCATGGAAGAGCTACAGTGTAATATTGTGGTCATGAAGCGTTCCCAACCAAAAGTACTTCGCTTGAATTTGATTGGATCACAAAAGGAAGCGGAAGAGTCACGTCCATTGCTTTCTGAGCACAATGAGCTGGCTGAAAATCGAACCGAAAAGAATGCCGATTCATTAAATTCCATTAAGGGGCCATCTGTAACTCCAACTAGCAGCCCGGAGCAAGGGACTCCGTTTACTGCAACGGAAGCTGGAACTTCATCAGTTTCAAGCTCTGATCCTGGAACTTCACCATTCTTTATCTCAGAGACAAATGGTGAGTTGAAGAAAGAGGAGACTATCAAAGAAAATCAAGAACTTGATGATTCAGACACAGAAAGTGAAAGTTTGTCCACATCTTCAGCAAGCTTAAGATTTCAGCCATGGATCACAGAATTACTTTTACATCAACAATCCTCTCAACGAAATGAAGAAAGGCAGGAAATATCTCATGATATGCCTCAAACATCTACAACGAGAGCCTTGCTAGAAAAGTTCTCAAGGCTCGATCGAGGAACAGGAAATGAAATGCCAACTTATAGAAATGAGTCAGATTTTAGTGGAAATCTCAGAGAGGCAATATCATTATCCAGAAATACGCCACCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAGGCACCTGTCTTCGGAAAACCTCCAAGATGGTTCAGCTATGCTGAGTTAGAACTTGCTACTGGTGGATTCTCTGAGGCCAACTTCCTGGCTGAGGGGGGATTCGGATCTGTTCATAGAGGGATTCTACCAGATGGACAAGTCATTGCTGTCAAGCAACATAAATTGGCTAGTTCTCAGGGTGACCTTGAGTTTTGCTCAGAGGTAGAAGTCCTGAGCTGTGCTCAGCACCGAAATGTTGTTATGCTGATTGGGTTCTGTATAGAGGATAAGAGAAGGCTACTAGTTTATGAGTACATATGCAATGGATCATTGGATTCGCATTTATATGGGAGACAGCGAGAACCATTAGAATGGGCTGCACGGCAAAAGATTGCCATTGGAGCTGCTCGTGGGTTACGATATCTTCATGAAGAGTGCAGAGTGGGATGCATTATCCACCGTGACATGCGGCCTAACAACATTCTCATAACTCATGATTTTGAACCACTGGTTGGTGATTTTGGATTGGCGAGGTGGCAACCTGATGGAGACACGGGTGTGGAAACCCGAGTAATTGGAACATTCGGGTATTTGGCTCCTGAATATGCTCAAAGCGGCCAAATAACTGAAAAAGCTGATGTTTATTCATTTGGGGTGGTATTAGTGGAGCTTGTTACAGGGAGAAAAGCCGTGGATCTCACTCGGCCTAAGGGACAGCAATGTCTTACTGAGTGGGCTCGACCTCTGTTGGAAGAATATGCCATCGAGGAACTGATTGACCCAAGGCTGGGGAGCCGATACATAGAAAATGAGGTCTATTGCATGTTGCACGCTGCAGCATTATGCATTCGGCGAGATCCTCATTCTAGACCACGCATGTCACAGGTTCTTCGGATACTAGACGGTGACATGGTCATGGACACAAGTTACATTTCAACTCCGAGTTATGATGCGGGAAACCGGAGTGGCCGACTCTGGTCGGAGCCGCTGCAGAGGCAGCATCATTACAGTGGCCCGCTGTTAGAAGAGTCACTTGAATCATTCAGTGGGAAGCTATCTCTTGACAAATACAGGCCTCCTTATTGGGATAGGGACAACAAAGCAAGAAGGACTTCATGTGAAGATGACATTTGA 2247 0.4517 MSREQQKGGGKQVKGSDGAEKVIVAVKASKEIPRTALVWSLTHVVQPGDCITLLVVVPSQSSGRRLWGFPRFAGDCASISKKYPPGTVSEQKHDITDSCSQMILQLHDVYDPNKINVRIKIVSGSPCGAVATEAKKAQANWVVLDKQLKHEEKRCMEELQCNIVVMKRSQPKVLRLNLIGSQKEAEESRPLLSEHNELAENRTEKNADSLNSIKGPSVTPTSSPEQGTPFTATEAGTSSVSSSDPGTSPFFISETNGELKKEETIKENQELDDSDTESESLSTSSASLRFQPWITELLLHQQSSQRNEERQEISHDMPQTSTTRALLEKFSRLDRGTGNEMPTYRNESDFSGNLREAISLSRNTPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSEANFLAEGGFGSVHRGILPDGQVIAVKQHKLASSQGDLEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQREPLEWAARQKIAIGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLTRPKGQQCLTEWARPLLEEYAIEELIDPRLGSRYIENEVYCMLHAAALCIRRDPHSRPRMSQVLRILDGDMVMDTSYISTPSYDAGNRSGRLWSEPLQRQHHYSGPLLEESLESFSGKLSLDKYRPPYWDRDNKARRTSCEDDI 748
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc121673g00002 748 MobiDBLite consensus disorder prediction 301 321 - -
Stsc121673g00002 748 MobiDBLite consensus disorder prediction 201 284 - -
Stsc121673g00002 748 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 680 - -
Stsc121673g00002 748 SUPERFAMILY Protein kinase-like (PK-like) 385 682 IPR011009 -
Stsc121673g00002 748 FunFam Dual-specific kinase DSK1-like 13 167 - -
Stsc121673g00002 748 ProSiteProfiles Protein kinase domain profile. 401 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121673g00002 748 Gene3D Transferase(Phosphotransferase) domain 1 477 682 - -
Stsc121673g00002 748 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Stsc121673g00002 748 CDD STKc_IRAK 407 673 - -
Stsc121673g00002 748 MobiDBLite consensus disorder prediction 205 254 - -
Stsc121673g00002 748 PANTHER OS01G0750732 PROTEIN 159 679 - -
Stsc121673g00002 748 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Stsc121673g00002 748 Pfam Protein tyrosine and serine/threonine kinase 406 670 IPR001245 GO:0004672|GO:0006468
Stsc121673g00002 748 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc121673g00002 Stsc-Chr121673 13554 18033 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121673g00002 381 690 Trihelix Transcription Factor Family AT1G70460 52.500 2.12e-104 333
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Stsc121673g00002 PK_Tyr_Ser-Thr 1.3e-40 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121673g00002 - - gmx:100816340 1314.29