Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121664g00004 ATGTCTGCAAATTTCTGGACTTCATCACACTACAAGCATCTTCTGGACCAAGAAGATGTGGATACGGTCAACATACATGACAAAGAAAAGGGAGTCACACTTGAGGATTTCAAGCTCATAAAGATGCACATGGCCAATTATATCTTGAGATTGGCTCAACAAGTAAAAGTGAGGCAGAGGGTTGTTGCCACTGCTGTTACATATATGAGGCGTGTTTACACCAAGAAGAGTATGGCTGAGTATGATCCACGTCTGGTTGCCCCAACCTGCTTATACCTAGCATCAAAAGCAGAAGAAAGCACAGTGCAGGCTCGGCTGCTTGTATTTTACATTAAAAAATTGTATACTGATGATAGGTACAGATATGAAATCAAGGACATACTTGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTTGTATTCCACCCGTATCGTTCCCTGTCTCAGTTTCTTCAGGATGCAAATTTGAATGACCTAAGCATGACTCAGCTAACGTGGGGCATCATAAATGACACATACAAGATGGATCTAATTCTTGTTCATCCTCCGCATCTGATTGCTTTAGCTTGCATCTACATTGCTAGCGTATTCAGGGAGAAAGACACAACTGCTTGGTTTGAAGAACTACATGTTGACATGAATGTGGTAAAAAATATATCAATGGAGATACTTGATTTTTATGAAAGCAACAGGGTTTTCACGGAAGACAGAATCAGTGCTGCTCTCCAGAAGCTAACCTTGAGGCCCTAG 762 0.4068 MSANFWTSSHYKHLLDQEDVDTVNIHDKEKGVTLEDFKLIKMHMANYILRLAQQVKVRQRVVATAVTYMRRVYTKKSMAEYDPRLVAPTCLYLASKAEESTVQARLLVFYIKKLYTDDRYRYEIKDILEMEMKILEALDYYLVVFHPYRSLSQFLQDANLNDLSMTQLTWGIINDTYKMDLILVHPPHLIALACIYIASVFREKDTTAWFEELHVDMNVVKNISMEILDFYESNRVFTEDRISAALQKLTLRP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121664g00004 253 PANTHER CYCLIN 31 234 IPR043198 GO:0006357|GO:0016538
Stsc121664g00004 253 PIRSF Cyclin_C_H_G 1 253 - -
Stsc121664g00004 253 Gene3D - 7 240 - -
Stsc121664g00004 253 FunFam cyclin-C1-2-like isoform X1 19 143 - -
Stsc121664g00004 253 SUPERFAMILY Cyclin-like 146 239 IPR036915 -
Stsc121664g00004 253 Gene3D - 19 143 - -
Stsc121664g00004 253 Pfam Cyclin, N-terminal domain 43 142 IPR006671 -
Stsc121664g00004 253 SMART cyclin_7 46 136 IPR013763 -
Stsc121664g00004 253 SMART cyclin_7 149 229 IPR013763 -
Stsc121664g00004 253 SUPERFAMILY Cyclin-like 8 144 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121664g00004 Stsc-Chr121664 11736 18723 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121664g00004 60 199 Core Cell Cycle Gene Families AT5G27620 30.667 1.19e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121664g00004 K15161 - gmx:100784345 452.21