Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121660g00002 ATGTCCAAAATACCCCTTCCTTTCTCCATCTTTCTCTCCCTAATTTTCTTTCCTCCCATCATCACACCCTCCTCGATCATAGACAGTTACCTCTACGGCGGCTGCACCCAACAAAAGTACACCCCCGCCTCGCCCTACGAGGCCAATCTCAACTCGTTACTCACCTCCCTCGTCAACTCGGCCACCTTCTCCACCTATAACAACTTCACCATGGTAGGCGGCAGTCAGCAGGACGTCGTCTACGGCCTGTACCAGTGCCGTGGCGACTTGTCCATGCCAGATTGCGCCACCTGTGTTGCACGTGCAGTCACAAAAGCTGGGGACATGTGCCGCGGTTCTTGTGGCGGCGCAGTGCAACTAGATGGATGTTATGTGAAGTATGACAACGCCACGTTTTTGGGCGTGGAGGATAAAGTGGTAGTGTTGAAGCAGTGTGGGCCCTCCGTGGGCTACAACCCAGAAGGGATGGGTAGTAGGGACGCTGTGCTGGGTGGGCTCGCGGGCTCTGGCGGCCCCTTCCGACAGGGAGGGTCCGGAGAAGTCCGCGGCATGGCCCAGTGCGTGGGGGATCTTAGCTATGGAGAGTGTCAGGATTGTGTCTCGGAAGCGATATCAAAGCTGAAGAGCGATTGTGGGACGGCGGATTATGGGGACATGTTCTTGGGGAAGTGTTATGCGAGGTATTCTATTGGCGGAGCCCATCAGGCCTCCAAGGCCCATGGTAAGGCCCGTGGCCCTGTGCTGCTTATTGTGGCGCTACTTCTAACAATAATTCTTGTTTCTTCGCTGTGA 792 0.5568 MSKIPLPFSIFLSLIFFPPIITPSSIIDSYLYGGCTQQKYTPASPYEANLNSLLTSLVNSATFSTYNNFTMVGGSQQDVVYGLYQCRGDLSMPDCATCVARAVTKAGDMCRGSCGGAVQLDGCYVKYDNATFLGVEDKVVVLKQCGPSVGYNPEGMGSRDAVLGGLAGSGGPFRQGGSGEVRGMAQCVGDLSYGECQDCVSEAISKLKSDCGTADYGDMFLGKCYARYSIGGAHQASKAHGKARGPVLLIVALLLTIILVSSL 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121660g00002 263 Gene3D - 163 231 IPR038408 -
Stsc121660g00002 263 Gene3D - 27 132 IPR038408 -
Stsc121660g00002 263 FunFam Cysteine-rich repeat secretory protein 60 153 231 - -
Stsc121660g00002 263 ProSiteProfiles Gnk2-homologous domain profile. 28 132 IPR002902 -
Stsc121660g00002 263 FunFam cysteine-rich repeat secretory protein 3 27 132 - -
Stsc121660g00002 263 ProSiteProfiles Gnk2-homologous domain profile. 133 233 IPR002902 -
Stsc121660g00002 263 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 8 255 - -
Stsc121660g00002 263 Pfam Salt stress response/antifungal 35 129 IPR002902 -
Stsc121660g00002 263 Pfam Salt stress response/antifungal 178 229 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121660g00002 Stsc-Chr121660 9371 10447 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121660g00002 12 230 Pollen Coat Proteome AT4G20670 24.691 1.17e-15 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121660g00002 - - adu:107457936 426.017