Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121626g00004 ATGGCACCAGAGTACATAATCGATGGGCTATTCTCAACAAAATCCGATGTGTACAGCTTTGGTGTGTTAGTATTGGAAATAGTTAGTGGGAAGAGAAACAGAGCATTCAGCCATAGAGATCACCACTTTAGTCTTCTTGGGCATGCATGGACATTTTTCAATGAAGAGCAGTGGTTAGATATAGTTGATGCATGTATGAAAGAGTCAATAAATTTACCAGAAGTGAAGAGATCGATTCATGTGGGTCTGCTATGCGTGCAACGAAGTCCAGAGGATAGGCCAAGCATGTCAGAGGTGCATATGATGCTGAGTAGTGAATGGGCATTGCCTCAACCGAAAAAGCCTGGATTCTTTACTGAGAGAGATTTGGTTGGTGAGAGTTCTTCATCAACCAACAGCAACAACAAAGGATTGTCAATTAGTAAATTCTCAGTTAGTGAGGTTGATCCACGGTAG 456 0.4189 MAPEYIIDGLFSTKSDVYSFGVLVLEIVSGKRNRAFSHRDHHFSLLGHAWTFFNEEQWLDIVDACMKESINLPEVKRSIHVGLLCVQRSPEDRPSMSEVHMMLSSEWALPQPKKPGFFTERDLVGESSSSTNSNNKGLSISKFSVSEVDPR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121626g00004 151 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 145 - -
Stsc121626g00004 151 MobiDBLite consensus disorder prediction 118 138 - -
Stsc121626g00004 151 Pfam Protein tyrosine and serine/threonine kinase 1 103 IPR001245 GO:0004672|GO:0006468
Stsc121626g00004 151 ProSiteProfiles Protein kinase domain profile. 1 103 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc121626g00004 151 Gene3D Transferase(Phosphotransferase) domain 1 1 111 - -
Stsc121626g00004 151 MobiDBLite consensus disorder prediction 123 138 - -
Stsc121626g00004 151 SUPERFAMILY Protein kinase-like (PK-like) 1 117 IPR011009 -
Stsc121626g00004 151 Pfam Domain of unknown function (DUF3403) 104 151 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121626g00004 Stsc-Chr121626 13951 14788 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121626g00004 1 151 Receptor kinase-like Gene Family AT4G23140 47.097 1.58e-39 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc121626g00004 PK_Tyr_Ser-Thr 3e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121626g00004 - - adu:107462379 217.624