Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121626g00003 ATGGAAGTGTTTATCACAATAAGCTTCCTCATCCTCATCTCTGTGCTATTGCTATGGCATGCAAATAAGGGTAATAAGAGTGTCCATAAAGTGCCACCTGGGCCATGGAAATTACCTATCATAGGGAACCTGCATCAACTTGTAGGCTCATCACTTCCACACCATGCTCTCACAAAACTAGCACAAAAACATGGTCCATTGATGCACCTTCAACTGGGTGAAATTTCTGCAGTGATTGTTTCTTCCCCCAGCATGGCCAGAGAAATCATGAAGACTCATGATCTTGCTTTTGCAGACAGGCCTGAGTTCCTTCCTTCTAAGATCATAGTCTATGATTCATCAGACATTGCATTCGCTCCCTATGGTGAATTCTGGAGACAGATGAGAAAGATATGCACACTTGAGCTTCTAAGTTCAAGGAAGGTTCAGTCTCTCTCCTATATAAGACAAGAGGAGGTAGCTAACATGGTACAAACAATTTTCAAATCCGCTGGTGAAACCATCAATCTCAGTAAAATGATTAACAATCTCATAAGCACTGTGGTTTCTAGAGCTGTGTTTGGCAACTTATCTCAAGACCATGAACAGTTTGTGTCCTTTGTGAAGAAGACAATAGCTTTATCTGACGGATTCGACCTTGCGGATTTGTTTCCTTCCTTCAAATCTCTGCATTTCATCACTGGTATGGAAGCCAAACTGTATAATATGCATGTCATGATCGACAAGATCTTAGACAAGATCATAAAGGAGAATGAAGAAAGGAAATTGGAAGATAATACACACCCAGAGTATGAAGAAAAGAACGAGAATCTTGTTGAGGTTCTCTTAAGAGTCCTACACAGTGGCACCCTTGACACCCCAATTACAATGAACAATGTCAAAGCAGTCATTTGGGACATATTTTCTGCTGGAACAGATACTTCAGGAGTAGTTATAGAGTGGGTTATGTCAGAGTTGATGAGAAATCCCGGAGCTATGAAGAAGGCACAGGCCGAGATTCGACATGCTTTGAGAGGAAAGCAAACAATCCAGGAGGCAGATGTATCAGAGCTTCCCTACTTGAAGGCTGTGATCAGTGAAACAATGAGGTTACACCCTCCTCTTCCTCTGTTGCTTCCAAGACAAGCCAGACAAGACTGCACCATCAACGGATACCATATACCCATCAATACTAAAATCATGGTAAATGTGTACGCGCTAGGAAGAGATCCAGATTACTGGTACGATGCAGAAACCTTCCTACCAGAAAGGTTTGAGGACAATCCTATGGATTTCAAAGGGACAAACTTTGAGTACATACCTTTTGGAGCAGGAAGGAGAATGTGTCCTGGGCTTAACTTTGGTTTGGCTAACTTGGAGTTTGCTCTGGCTATGCTACTCTACCACTTCAACTGGGAACTCCCTGATGGAATTATGCCAGAGGATTTGGATATGAATGAAGCACAAGGAGCCGTCGTTGGAAGGAAAAACAACCTTTACTTGATTCCCACGCCTTATCATTATTCTTAG 1509 0.4228 MEVFITISFLILISVLLLWHANKGNKSVHKVPPGPWKLPIIGNLHQLVGSSLPHHALTKLAQKHGPLMHLQLGEISAVIVSSPSMAREIMKTHDLAFADRPEFLPSKIIVYDSSDIAFAPYGEFWRQMRKICTLELLSSRKVQSLSYIRQEEVANMVQTIFKSAGETINLSKMINNLISTVVSRAVFGNLSQDHEQFVSFVKKTIALSDGFDLADLFPSFKSLHFITGMEAKLYNMHVMIDKILDKIIKENEERKLEDNTHPEYEEKNENLVEVLLRVLHSGTLDTPITMNNVKAVIWDIFSAGTDTSGVVIEWVMSELMRNPGAMKKAQAEIRHALRGKQTIQEADVSELPYLKAVISETMRLHPPLPLLLPRQARQDCTINGYHIPINTKIMVNVYALGRDPDYWYDAETFLPERFEDNPMDFKGTNFEYIPFGAGRRMCPGLNFGLANLEFALAMLLYHFNWELPDGIMPEDLDMNEAQGAVVGRKNNLYLIPTPYHYS 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121626g00003 502 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 PANTHER OS08G0105600 PROTEIN 55 500 - -
Stsc121626g00003 502 CDD CYP71-like 63 492 - -
Stsc121626g00003 502 FunFam Cytochrome P450 71D8 24 496 - -
Stsc121626g00003 502 SUPERFAMILY Cytochrome P450 32 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 Gene3D Cytochrome P450 24 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 Pfam Cytochrome P450 32 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121626g00003 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121626g00003 Stsc-Chr121626 11465 13181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121626g00003 4 499 Cytochrome P450 AT3G26300 40.792 5.73e-137 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121626g00003 - K15472 gmx:100800554 634.795