Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121625g00002 ATGTTATCTTTCGTGGCTCTTCTCTTCTCTCTTCTCCTTCTTCACCAAATCCTCTCTTCCAAGAGAAACAAATGTACTCCTCCAAGCCCACCATCACTTCCCATAATTGGCCATCTCCACCTCCTCAAACCCTTACTCCATCAAGCCTTCAAAGACCTCTCACAAAAATATGGACCCCTTATCTTCCTTAAAATCGGCTCGGCTCGGTTTGTGGTTGTTAGCAATCCATCTCTGGCCAAAGAATTTCTCAAAGTAAATGAAGTTGCATACTCTGCTCGTAAAGTGAACATGGCTATAGACATGGTTACCTACCATGATGCCACCTTTGCTTTTGCCCAATGCAACACCTATTGGAAGTTCATGAAAAAACTTAGCAACTCTGAGCTTTTGGGTAATCGAACTCTCTTGCGATTTCTCCCCGTTCGAACAAGGGAAATCCACGAGTTCATTCGATCTCTAGCTGAAAAATCAATGGCTAATGAGAGTGTGAACCTAACTGAATCGCTTATGAAGCTCTCTAACAACATCATATCTCAAATGATGCTTAGCATCAAGAGTAGTTCTGATGAGACAGAAGATGGACAAGGTGAAGAGGCTAGGGTTTTGGTCCGAGAAGTGACTAAGATCTTTGGAGAATTCAATATTTCAGACTTCATAGGATTCCTTAAAGTGTTGGACTTGCAGGGTTTCAAGAACAGGGCCATGCAGATACATAAAAGGTATGATGTATTGTTGGAGAAGATTATTTCTGACCGCGAGACCTTAAGAAATAAGAAGATGATGAATATTGTGAACAAGAGTGGTGATGGTGATAAAGATGATAAAGTGAAGGATTTTCTTGACATTTTACTTGATGTTTCTGAGGACAAAGATTGCGAGGATTTCTTCACAGCAGCAACCGATACAACAGCAATCTCAGTACAGTGGGCAATAGCTGAACTGTTCAACAACCCAAGAGTGTCAAAGAAGGCACAAGAGGAGGTAGACAGAGTCACTGGAAACCAAAGATTGTTGCGTGAAGAGGACAGTCCAAACCTTCCTTACATCCATGCGATCATAAAAGAAACACTAAGAATCCATCCTCCTATACCGCTCCTTATGAGGAAGGGACTCACAGATTGCGTAGTTGGCGGTTATAAGATCCCAAAAGGCTCAATGGCATGTATTAATATTTGGGCCATGGGCCGAGACCCAACCTTATGGGAAAGCCCAATAGAGTTCAGGCCCGAGAGATTTCTTGAAGGTGAAGGCAAAACCTTAGATACAAAAGGCAACAACTTCGAGTTGTTGCCTTTTGGTACAGGAAGGAGGGGTTGTCCTGGCATGCCGTTGGCCATGAGGGAGTTACCTGCCATTATTGGTGCTCTTGTTCAGTGCTTTAATTGGAAAATGTTTGATCCCAAAGGAAAATTATTAGATCATGGAACACCGATTGATATGGATGAACAACCAGGATTAACTGTTCCTAGAGCCCATGATCTTATTTGCATCCCAGTTGCAAGACTCAATCCTATTCCACTTCTACAACTTTAA 1533 0.4234 MLSFVALLFSLLLLHQILSSKRNKCTPPSPPSLPIIGHLHLLKPLLHQAFKDLSQKYGPLIFLKIGSARFVVVSNPSLAKEFLKVNEVAYSARKVNMAIDMVTYHDATFAFAQCNTYWKFMKKLSNSELLGNRTLLRFLPVRTREIHEFIRSLAEKSMANESVNLTESLMKLSNNIISQMMLSIKSSSDETEDGQGEEARVLVREVTKIFGEFNISDFIGFLKVLDLQGFKNRAMQIHKRYDVLLEKIISDRETLRNKKMMNIVNKSGDGDKDDKVKDFLDILLDVSEDKDCEDFFTAATDTTAISVQWAIAELFNNPRVSKKAQEEVDRVTGNQRLLREEDSPNLPYIHAIIKETLRIHPPIPLLMRKGLTDCVVGGYKIPKGSMACINIWAMGRDPTLWESPIEFRPERFLEGEGKTLDTKGNNFELLPFGTGRRGCPGMPLAMRELPAIIGALVQCFNWKMFDPKGKLLDHGTPIDMDEQPGLTVPRAHDLICIPVARLNPIPLLQL 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121625g00002 510 Pfam Cytochrome P450 27 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PANTHER STEROID 21-HYDROXYLASE-RELATED 9 491 - -
Stsc121625g00002 510 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 307 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 287 304 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 54 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 172 190 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 350 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Stsc121625g00002 510 Gene3D Cytochrome P450 15 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS P450 superfamily signature 351 362 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS P450 superfamily signature 298 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc121625g00002 510 Coils Coil 321 341 - -
Stsc121625g00002 510 SUPERFAMILY Cytochrome P450 27 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121625g00002 Stsc-Chr121625 13493 15361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121625g00002 12 501 Cytochrome P450 AT5G06900 40.079 5.86e-131 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121625g00002 K23179 - gmx:100783503 688.337