Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121620g00001 ATGAAAATCGTTCTTCTTGGTGTCTTAGGAAGCTCATCTCAGGTATTGGGGTATGCTGGCATCAGTTACAGTTCTCCAGCACTTGCTTCGTCGATAAGCAACCTTCTCCCTGCTTTCACATTCTTGCTTGCCGTCGCATTCAGGAAGGAAAAGCTAGCAGCAAAGAGTAGAAGTAGCCAAGCTAAGGTAATAGGAAGCATTGTATCAATAGGAGGAGCATTTGTAGTGACATTCTACAAAGGTCCTTCTATCAACATTTTTCAAAGTCGCCTTTCTTTACCAACTGAACAACAAGTTATTAGCATTCCAAATTCAGTAGATACAACTTGGGTCATTGCTGGAGCTCTTCTCACAGCTGATTACTTACTGGTTTCACTAGGTTTCATTTGGCAGGTGGAAATCATGAAGGAGTACCCTGATGAGTTATCTGTGGTCTTCTTTTACAATGTCACTGCTACTATTGTGTCATTCACTGTAGCTTTATTCAGTGAGCCAAGAGCAAGTGCTTGGAAAATAGGACTTGACATATCATTGGTTTCTATTGTTTGCACTGGAATATTTGGAAAGTTCATGAGCACTGCAGTTTATACATGGGCATTGCACTTAAAGGGAGCTGTCTATGTAGCAACATTCAGGCCACTCTCAATTGTTATCGCCATTGTTATGGGAGTTATGTTCCTTGGTGATACTCTTCACATTGGAAGTATAATTGGAGCTGCAATAATATCAATCGGCTTTTATACTGTATTGTGGGGCAAAGCAACAGAAGAGACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATTTTGGTAACCAGGAATCAGAAACTACTGAGAATGTTCCTCTTTTGCATAGCTATAAAACTGTACATGAAAATGTATATAATACAAGTACAAACTCTTCACAGTTAATATAA 915 0.3923 MKIVLLGVLGSSSQVLGYAGISYSSPALASSISNLLPAFTFLLAVAFRKEKLAAKSRSSQAKVIGSIVSIGGAFVVTFYKGPSINIFQSRLSLPTEQQVISIPNSVDTTWVIAGALLTADYLLVSLGFIWQVEIMKEYPDELSVVFFYNVTATIVSFTVALFSEPRASAWKIGLDISLVSIVCTGIFGKFMSTAVYTWALHLKGAVYVATFRPLSIVIAIVMGVMFLGDTLHIGSIIGAAIISIGFYTVLWGKATEETEEEEEEEEEDFGNQESETTENVPLLHSYKTVHENVYNTSTNSSQLI 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121620g00001 304 SUPERFAMILY Multidrug resistance efflux transporter EmrE 3 80 - -
Stsc121620g00001 304 MobiDBLite consensus disorder prediction 256 281 - -
Stsc121620g00001 304 Coils Coil 255 275 - -
Stsc121620g00001 304 PANTHER WAT1-RELATED PROTEIN 2 263 IPR030184 GO:0016020|GO:0022857
Stsc121620g00001 304 Pfam EamA-like transporter family 123 250 IPR000620 GO:0016020
Stsc121620g00001 304 SUPERFAMILY Multidrug resistance efflux transporter EmrE 154 253 - -
Stsc121620g00001 304 MobiDBLite consensus disorder prediction 256 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121620g00001 Stsc-Chr121620 429 3579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121620g00001 2 288 Nodulin-like Gene Family AT3G28050 48.805 2.40e-92 277
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121620g00001 - - gmx:100790743 349.747