Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121611g00003 ATGTTCATGAAAGCATGGGCCTATACATGCTCCATGATCTCTCAAACTCCATCCATGTCTTCTTCTTCTTCTTGGTCACTTCCTCAGAATCTAACACCCATCTTTGACAGATCAGCTGTGAAGGACCCAAAGGGAATCGCCGAGTTGTACGCCAATACATGGTTGAACTTCGGCGGTGAAAACAATCGGAATCTCAAGATATTGGAGTCTCCAATCAAGAAAGCAGGAACCGAGGTAGTTAAAGGGGAGTTTGAATTGAAGCCTTCGCAGATTCAGAAGCTAAAGCAGTATGCAAAATCCAATAACTTGGAATCCAAGGTTTCAACTTTTACGGTTACTAGCTCTTATTTGTTGCATTGCTTGGTGAAAGCAGAGGAACCAGAGTGCAACAAAGTTGCATTTTTGTTTAATGTGGATTGCAGATCCCGTTTGGAGCCTCCATTGGAACCATCATACTTTGGGAACTGCGTGGCGATTCCATTGATATTGGTAGAGAAGGAGAGGATAGAAGGGAATGATGGGTTCATGAATGCTCTCAAGGTGATAACAGAGGTGTTATATGATTTGGAGAAGAATGAGAATGGGGTGCTAAATGGGGCAGAGAATTACATGTTAATGGTGCAATCTGTGGTTGGAGAAGGGAGTAGAATGTACTCGGCTTCAGGTTCGCCTTGGTTTGGGGTTTATGGGATTGATTTTGGATTTGGAAGGCCTAAAAGAGTTGATGTTGCTTCTGTTAACAAGACAGCTTCTTTTTCTCTTTCTGAAGGTACCAATCTTGATGGTGGAATTGAGATTGGTTTGGCTCTTAACAAGAACCACATGGAGGCTTTTGCTGCTCTTTTTCATCAGGAAATTGAAACCTTTTAA 870 0.423 MFMKAWAYTCSMISQTPSMSSSSSWSLPQNLTPIFDRSAVKDPKGIAELYANTWLNFGGENNRNLKILESPIKKAGTEVVKGEFELKPSQIQKLKQYAKSNNLESKVSTFTVTSSYLLHCLVKAEEPECNKVAFLFNVDCRSRLEPPLEPSYFGNCVAIPLILVEKERIEGNDGFMNALKVITEVLYDLEKNENGVLNGAENYMLMVQSVVGEGSRMYSASGSPWFGVYGIDFGFGRPKRVDVASVNKTASFSLSEGTNLDGGIEIGLALNKNHMEAFAALFHQEIETF 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121611g00003 289 Pfam Transferase family 69 280 - -
Stsc121611g00003 289 SUPERFAMILY CoA-dependent acyltransferases 84 287 - -
Stsc121611g00003 289 Gene3D - 1 65 IPR023213 -
Stsc121611g00003 289 PANTHER - 1 288 - -
Stsc121611g00003 289 Gene3D - 76 289 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121611g00003 Stsc-Chr121611 19507 20427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121611g00003 64 278 Monolignol Biosynthesis Gene Families AT5G48930 25.991 4.59e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121611g00003 - - gmx:100785084 278.485