Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121611g00002 ATGCGTAAATTGAAACCGTTCTTTTTCTCTTTTCTTCTTCTCTTCTACGGCGCCGTTGGAGCACACGATTCCGTCCCTCTCACCGTTTCCGAATCAAACGAAGATTTCAACCACGTTAGCTCCGACTTCTGTGAGGCTTCTAAACGGCACCGTTTCGTACCTAGCTTGAGCGTTTCCGATGAGAAAACATCGTTGCTTGCATTACAGATTACTTTCTTTCCAAACTCCGGCTTTGTAATCGGAATAACACCACACCATGCAGCTCTCGATGGAAACTGCTCAACGCTTTTTCTAAAAGCTTGGGCCTACGCATGCTCCAAGATCATGCAAGATCCATCTCTATCATCGTTACCTGAAAATCTAACACCGTTTCTTGATAGATCCGTTATCAAGGACCCCGAAGGACTCACCCAATGGTTTGCCGACACGTGGCTGAACATGAATGGACCCAACAATAGGAGCGTCAAGCTCTGGGAAACCAACAGCAACGAAGCAGCACAGATCGATATGAAATCGGTTAAAAGAGTGTTTAAATTGAATCCCTCTCACATTGAAAAGCTCAAGAATTATGCGAAATCGAAAACCGGTATAGTTAAGGTTTCAACTTTTTCTGTTACAGTTGCTTATTCCTTATCATGCTTAGTGAAAACAGAACAACCAGAGAACGAGAACATTGCTCTTTTGTTCAGTGTGGATTGTAGATCAAGATTGGAGCCAGTGATTTGTCCAAGTTATTTCGGTAACTGCCTCTTGACGCGTTTGGTTTCCGAAGAGAAAGAGAAGGTGATGGCGAATGAAGGATTTGTAACCGTGCTGAAAGGGATAAGCGAGGTTTTGATTGGGCTGGAGAGTGAGGTTCCGAATGACGAAGAAAAACGGTTCAAGAAGGCTGAAAGTGCTTTTTCGGAAGGGAAGAGAGTGTACACCGTTGCAGGTTCAACCAGGTTTGGGGTTTATGGGATTGATTTTGGATATGGAAGGCCTAAGAATGTTGATGTTGCTTCGGTGGATAAAACTGGAGCTTTTTGCACTGTCTGA 1038 0.4403 MRKLKPFFFSFLLLFYGAVGAHDSVPLTVSESNEDFNHVSSDFCEASKRHRFVPSLSVSDEKTSLLALQITFFPNSGFVIGITPHHAALDGNCSTLFLKAWAYACSKIMQDPSLSSLPENLTPFLDRSVIKDPEGLTQWFADTWLNMNGPNNRSVKLWETNSNEAAQIDMKSVKRVFKLNPSHIEKLKNYAKSKTGIVKVSTFSVTVAYSLSCLVKTEQPENENIALLFSVDCRSRLEPVICPSYFGNCLLTRLVSEEKEKVMANEGFVTVLKGISEVLIGLESEVPNDEEKRFKKAESAFSEGKRVYTVAGSTRFGVYGIDFGYGRPKNVDVASVDKTGAFCTV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121611g00002 345 Gene3D - 16 156 IPR023213 -
Stsc121611g00002 345 SUPERFAMILY CoA-dependent acyltransferases 176 282 - -
Stsc121611g00002 345 Gene3D - 169 345 IPR023213 -
Stsc121611g00002 345 PANTHER - 21 342 - -
Stsc121611g00002 345 Pfam Transferase family 45 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121611g00002 Stsc-Chr121611 14566 15743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121611g00002 41 328 Monolignol Biosynthesis Gene Families AT5G48930 22.000 9.89e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121611g00002 - - ahf:112797053 315.849