Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121606g00001 ATGGCAAGCGTTCTTAGCCAGCAGCAACAGCCAGCAGGGAGTGGTGGTAACAACCGCATCGTCGCCGTCAATGCCACACCTCCTAATATCAACAACCTCCATAGTCATGATGATGCCCCCTCAAATCACAAGGAGAAACCAGGGTGGAAGAAGTTTCTGTCATTTGTAGGACCTGGTTTCCTCGTATCTCTTGCTTACCTTGATCCGGGAAACTTGGAAACTGATCTCCAAGCTGGAGCTAATCACCAATATGAGCTGCTGTGGGTGATACTTATCGGACTGATATTTGCCCTCATTATTCAGTCATTAGCTGCAAATCTTGGCGTAAGCACAG 334 0.479 MASVLSQQQQPAGSGGNNRIVAVNATPPNINNLHSHDDAPSNHKEKPGWKKFLSFVGPGFLVSLAYLDPGNLETDLQAGANHQYELLWVILIGLIFALIIQSLAANLGVST 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121606g00001 111 MobiDBLite consensus disorder prediction 1 45 - -
Stsc121606g00001 111 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 35 111 IPR001046 GO:0016020|GO:0030001|GO:0046873
Stsc121606g00001 111 MobiDBLite consensus disorder prediction 1 36 - -
Stsc121606g00001 111 Pfam Natural resistance-associated macrophage protein 73 111 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121606g00001 Stsc-Chr121606 160 1673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121606g00001 1 111 Inorganic Solute Cotransporters AT1G80830 53.153 1.82e-29 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121606g00001 K21398 - gmx:100787785 161.384