Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121569g00003 ATGTTTGAGAGTGTTCCTAATGGAGATGCCATTTTCATGAAGTGGATACTTCATGATTGGAGTGATGAACAATGCATGAAGGTGTTGAAGAATTGCCACAAGGCCATTCCTGAGGATGGAAAAGTGATAGTTGTAGAAACAATGGTTCCAGTTTTGCCGGAGAATACAAAAGCTGCTCAGGCTGCTTTCAAAGGTGACTTATTTATGATGACTCAAGACATTGGAGGAAAAGAGAGAACAAAGCATGAGTTCATTCAATTGGCCAAGGCTTCTGGATTTTCTGCCATCAAATTTGTTTGCTCTGCTTCTATATATTGGGTTATGGAGTTCTACAAGTAA 339 0.3953 MFESVPNGDAIFMKWILHDWSDEQCMKVLKNCHKAIPEDGKVIVVETMVPVLPENTKAAQAAFKGDLFMMTQDIGGKERTKHEFIQLAKASGFSAIKFVCSASIYWVMEFYK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121569g00003 112 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
Stsc121569g00003 112 PANTHER O-METHYLTRANSFERASE 1 110 IPR016461 GO:0008168
Stsc121569g00003 112 Pfam O-methyltransferase domain 1 94 IPR001077 GO:0008171
Stsc121569g00003 112 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 111 IPR029063 -
Stsc121569g00003 112 Gene3D Vaccinia Virus protein VP39 2 101 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121569g00003 Stsc-Chr121569 12283 13926 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121569g00003 1 112 Monolignol Biosynthesis Gene Families AT5G54160 53.571 4.87e-38 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121569g00003 K13066 - adu:107473094 198.364