Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121569g00001 ACCGAACTGAAAGGTGCAATATTGGAAGGAGGTGTGGCATTCGATAGGGCTCATGGGACGAACACATTTGAGTATACAAGTGTAGATTCAAGGTTCAATGATGTTTTCAACAAAGCTATGCTAAACCATACAACCATAATGATGAAGAGAGTTCTTGAGTGCTATGAAGGTTTCAACAACATTAACACACTTGTTGATGTTGGTGGTGGTCTTGGCATCAATCTCAAAATGATCACTTCAAAATATCCTAATATCAATGCAATTAACTTTGACTTGCCTCATGTAATTGAGCATGCCCCCAACTATGCCGGTGTGAAACATGTGGGAGGAGATATGTTTGAAAGCGTTCCTTATGGAGATGCCATTTTCATGAAGAGTGATGAACACTGCATGAAGGTGTTGAAGAATTGCCACAAGGCCATCCCTAGAGATGGAAAAGTGATAGTTGTAGACACAATGGTTCCGGTTTTGCCGGAGAATACAACAGCTGCTAAGGTTGCTTTCAAAGCTGACTTGTTGATGATGACTCAAAGCATTGGAGGAAAAGAGAGAACAAAGCATGAGTTCATTCAATTGGCCAAAGCTTCTGAATTTTCTGCCATCAAATTTGTGTGCTCTGTTTCTGGATATTGGGTTATGGAGTTCCACAAATAG 654 0.4052 TELKGAILEGGVAFDRAHGTNTFEYTSVDSRFNDVFNKAMLNHTTIMMKRVLECYEGFNNINTLVDVGGGLGINLKMITSKYPNINAINFDLPHVIEHAPNYAGVKHVGGDMFESVPYGDAIFMKSDEHCMKVLKNCHKAIPRDGKVIVVDTMVPVLPENTTAAKVAFKADLLMMTQSIGGKERTKHEFIQLAKASEFSAIKFVCSVSGYWVMEFHK 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121569g00001 217 Pfam O-methyltransferase domain 2 198 IPR001077 GO:0008171
Stsc121569g00001 217 Gene3D - 13 51 IPR036388 -
Stsc121569g00001 217 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 3 215 IPR029063 -
Stsc121569g00001 217 PANTHER O-METHYLTRANSFERASE 10 198 IPR016461 GO:0008168
Stsc121569g00001 217 Gene3D Vaccinia Virus protein VP39 33 207 IPR029063 -
Stsc121569g00001 217 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 217 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121569g00001 Stsc-Chr121569 2881 5731 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121569g00001 3 217 Monolignol Biosynthesis Gene Families AT5G54160 54.751 9.06e-86 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121569g00001 K13066 - gmx:100789402 340.117