Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121560g00006 ATGGAAGAAAAGCATAACCTTGATGCTGCAAGAAAGTGCTTGCACGCTAGCTTGGAAACTTCAGGTGCTATTGCTTCTGCATTAGATGAATCTGGATCAAGATTGGAGCTTCTTCGCCACCGATGTCAATCCCTGCAAGCTTCATTCAGACCAATCTCCATGCAGAAATGCTCGTTCGTCGACGTTAGCAACGGTATAGATAGTGTTCTATGTTCTGCTGCTGCTGTCCTCAAGGTGTTTGAATTTGTCCAACAGTTGGAGAACTCTTTATTGACAGACCCTGGTTCTGATCTATGCTCCTACGTCTCAGATGCCAAGAAGCTGGAAGAAGCTTTGAAGCTTCTCACTGATAATTGCACGTTAGCAATTGGCTGGTTGCAGGGTGTTCTTGACTTCTTACAAGACAAAGCAATCACCAATGAGCTTTACCTCTTTCAGGTGAAGAAATCTTTGAGGATACTGCGAGAATTGCAAGCCGTGGAAGAGGTAGCTCGCATTGATGGAGGTTTTCTCAGCGCAGCCTTAGACAAGCTAGAGACTGAGTTTCGAAGACTTCTGATGGCAAACTCTATGCCCATTCCTTTGGTTTCCTTAGGATCACACACTGCAGCACAAGCTTTGGCGGGTTCTGTTATGGGGAAGTTGCAAGCCATCATTGATAGATTAAATGCAAACAGCAGGCTAGACAAGTGTAAGTCTATATACATTGAAGTTCGAGGGACGAATGCTCAAAGAACTTTAAACACTTTAGATTTGAGCTACCTTGAGATTCCAACTGCTAAATTTGAGGATAAAATTGGCCGAGAAGCATCGACAGAGTGTTTTGCCAAGATCGCCATCAAATCAGGAATTCTTTCTCTCATTCGATTTGGAAGGAATGTTTCGGAGAGTAGAAACGATCCCTACAAGTTGTTGAACCTGCTGGACATATTCAGTGTCTTAGATGATCTTAGACTAAAATTCAACCAACTGTTTGGTGGGAAAGCCTGCGAAGAAATTAGAATCGCGACCAAGGATCTTGTCAACAAAGTTGTCAATGGTGCCTGCGAGATATTCTGGCAACTCCCAGCACAAGTGAAGTTGCAAAGGCCAAGTTCTCCTCCCCGAGATGGCGGTGTCCCTAGGCTGGTAAGCTTTGTAACCGATTACTGCAATCAGCTACTTAATGATACATATCTACCACATTTGAAAAAGGTCCTAGAAATTCATCTTAGTTGGAGAAATGAAACATATGAAGAGAGTATTGTTTTCACACAAATATATGACACAATCAAGGAAGTTGCAGTTAATCTTGATTCTTGGTCAAAGGCCTATGAAGATATCACATTGTCCTACATTTTCATGATGAATAATCATTGCCATTTCTACAATTTGAGGGGTACTATGCTTGGGGGTATGATGGGAGATACTTGGTTAGGAGCACATGAACAATACAAAGACTATTATTCAGCACTGTATTTGAGGAATAGCTGGGGAAAGCTTCTATCAATTATTGTTCAAAAAGACTTACTTTCATCCTCATTGACTAGCCAAGACTTGGGAAAGAGATTACATGCTTTCAATTTAGCTTTTGATGAGAGGTACAAGAAGGAATCTGGTTGGACAATTTGTGATGAGGCCTTGAGGAAAAACATATGCAGGCATTTGGTGGAATGTATTGTACCAATCTATAAGGCCTATGTGAAGAATTACAATCTGTCAACTGAGAATGAAGGCATGGTTACAAAGCATATCAAATATACAGCAGAGACTTTGGAGAATAAGATTCGGTCTATGTTTCAGCCAAAGCTGAAGAAGCATGGGAGTGCCAAGTATGCAGATTGGACTAGCAAAATAAAACGAGTGAGCAAAAATTTTCGCTTCACTCTAGCTGCTTAG 1878 0.4143 MEEKHNLDAARKCLHASLETSGAIASALDESGSRLELLRHRCQSLQASFRPISMQKCSFVDVSNGIDSVLCSAAAVLKVFEFVQQLENSLLTDPGSDLCSYVSDAKKLEEALKLLTDNCTLAIGWLQGVLDFLQDKAITNELYLFQVKKSLRILRELQAVEEVARIDGGFLSAALDKLETEFRRLLMANSMPIPLVSLGSHTAAQALAGSVMGKLQAIIDRLNANSRLDKCKSIYIEVRGTNAQRTLNTLDLSYLEIPTAKFEDKIGREASTECFAKIAIKSGILSLIRFGRNVSESRNDPYKLLNLLDIFSVLDDLRLKFNQLFGGKACEEIRIATKDLVNKVVNGACEIFWQLPAQVKLQRPSSPPRDGGVPRLVSFVTDYCNQLLNDTYLPHLKKVLEIHLSWRNETYEESIVFTQIYDTIKEVAVNLDSWSKAYEDITLSYIFMMNNHCHFYNLRGTMLGGMMGDTWLGAHEQYKDYYSALYLRNSWGKLLSIIVQKDLLSSSLTSQDLGKRLHAFNLAFDERYKKESGWTICDEALRKNICRHLVECIVPIYKAYVKNYNLSTENEGMVTKHIKYTAETLENKIRSMFQPKLKKHGSAKYADWTSKIKRVSKNFRFTLAA 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121560g00006 625 Gene3D Exocyst complex component Exo70 133 600 - -
Stsc121560g00006 625 SUPERFAMILY Cullin repeat-like 76 593 IPR016159 -
Stsc121560g00006 625 PANTHER EXOCYST COMPLEX PROTEIN EXO70 73 593 IPR004140 GO:0000145|GO:0006887
Stsc121560g00006 625 Pfam Exo70 exocyst complex subunit 268 590 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121560g00006 Stsc-Chr121560 18638 20714 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121560g00006 5 613 EXO70 exocyst subunit family AT4G31540 44.562 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121560g00006 K07195 - gmx:121175138 864.759