Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121545g00003 ATGTCTTTCCCCAATCAGGCATTTTGGATGGCAAAGGATACTGGAAGTTTGAATGATGGTGACATGACATGTGACGATTCTTCTAGACTTGAGTCCAAGAGGGCTCATCAATGGTTCATGGATGCTCCTGAAGCGGAATTATTTCCCAATAAGAAACAGGCAGTAGCTCCCCCAAACAATTTACTGTCAGGAATGCTTAACTCCAATCTTTCTTCTTGGGGAAATTCCTCAAGTTTCCAACCTTTAACCGATGATTTCACTGAACAATTGTTTGACCCAGATACAGCTACTACCAATCATGGGGATGCAAATATTTCATCTGTTAGCATGGACAATAAGTTAGGTGGAGAGAGAAAGGATAGCATGAATCCCTATGGGAGTGCTCCATCATTTGGTTTATCAATGTCCTGTACATTGGATGATCCTTGTTTAGTTTTCAATTATGATGGAATTAGAAAAGTTAAAGTTAATGAAGTGAAGGAATCTCATAATGGCATGTCTGTCCCTGAAAATAATCCCTATGATAATGGAGTCAGCAGCACTGTGTTAAATCCTCAGGCATACAAGGGTGACGATAGTTCCATGTCAATGAATCTCGCCTACACCAAAGGGGATGCTAATATAATATCAATGGATGACCCGTACTGCAGGACAGATAACAGTTTAATGTCAGTGGTTCAATCTCATAACAAGGGAGAGGATGGCTTATCTATTCATCAAACGTACAAAGACATTTGTAATACAATATCAATGGATCAAGGATTTAGCAAGGTGGATAGCAGCATGGCATCTATTGCCCAAGCTTATAAGGCTGATGACAATTCTATGTTAAGAGATTACTTTTTTGACAAGGTTGAAAATGGCACCGTATCAGCGGGTCAACCATATGGCCTGGGAGGAAACAACATGCCATTTGTTTCACCTTCTTATAACAGTGGGGAGAGCACTATTATATCCTTCGGTGGCTGCGATGATGATGATCCAACTCACTCTGGCCTATTCGTTTCCAGCTATGACATGTTGATGGGTCAAGCACTTAAACAGAAGTCGGAAGCTGTGAATGAGAAAGAGTTTGCAAGATCTAATTCTAATTTACTTCTGAATACAGCCCACACATCTGCATCTGAAACTGAAAGTGTTTCCAAGACAAAAGAAGAGATAAAGATGTCTAAGAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGCATGCTTGATGGTGTCTCTGTAAAGTATAAGGCTTGGTCGCGGGAGGTAAAATTTAGTATTCATGAGTTCATCTTTAACAGTAGCTTATCTGTCATCACATGTCTGGTTCTTCCTCTGCTTGTTAGAAGGAGCTTCGAGGAGTTATAA 1374 0.4025 MSFPNQAFWMAKDTGSLNDGDMTCDDSSRLESKRAHQWFMDAPEAELFPNKKQAVAPPNNLLSGMLNSNLSSWGNSSSFQPLTDDFTEQLFDPDTATTNHGDANISSVSMDNKLGGERKDSMNPYGSAPSFGLSMSCTLDDPCLVFNYDGIRKVKVNEVKESHNGMSVPENNPYDNGVSSTVLNPQAYKGDDSSMSMNLAYTKGDANIISMDDPYCRTDNSLMSVVQSHNKGEDGLSIHQTYKDICNTISMDQGFSKVDSSMASIAQAYKADDNSMLRDYFFDKVENGTVSAGQPYGLGGNNMPFVSPSYNSGESTIISFGGCDDDDPTHSGLFVSSYDMLMGQALKQKSEAVNEKEFARSNSNLLLNTAHTSASETESVSKTKEEIKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREVKFSIHEFIFNSSLSVITCLVLPLLVRRSFEEL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121545g00003 457 PANTHER AUTOIMMUNE REGULATOR 8 424 - -
Stsc121545g00003 457 MobiDBLite consensus disorder prediction 94 122 - -
Stsc121545g00003 457 MobiDBLite consensus disorder prediction 94 111 - -
Stsc121545g00003 457 MobiDBLite consensus disorder prediction 372 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121545g00003 Stsc-Chr121545 7402 10695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121545g00003 364 430 PHD Transcription Factor Family AT3G53680 42.029 4.43e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121545g00003 - - gmx:100794765 486.878