Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121545g00002 ATGTCTTTCCCCAATCAGGCATTTTGGATGGCAAAGGATACTGGAAGTTTGAATGATGGTGACATGACATGTGACGATTCTTCTAGACTTGAGTCCAAGAGGGCTCATCAATGGTTCATGGATGCTCCTGAAGCGGAATTATTTCCCAATAAGAAACAGGCAGTAGCTCCCCCAAACAATTTACTGTCAGGAATGCTTAACTCCAATCTTTCTTCTTGGGGAAATTCCTCAAGTTTCCAACCTTTAACCGATGATTTCACTGAACAATTGTTTGACCCAGATACAGCTACTACCAATCATGGGGATGCAAATATTTCATCTGTTAGCATGGACAATAAGTTAGGTGGAGAGAGAAAGGATAGCATGAATCCCTATGGGAGTGCTCCATCATTTGGTTTATCAATGTCCTGTACATTGGATGATCCTTGTTTAGTTTTCAATTATGATGGAATTAGAAAAGTTAAAGTTAATGAAGTGAAGGAATCTCATAATGGCATGTCTGTCCCTGAAAATAATCCCTATGATAATGGAGTCAGCAGCACTGTGTTAAATCCTCAGGCATACAAGGGTGACGATAGTTCCATGTCAATGAATCTCGCCTACACCAAAGGGGATGCTAATATAATATCAATGGATGACCCGTACTGCAGGACAGATAACAGTTTAATGTCAGTGGTTCAATCTCATAACAAGGGAGAGGATGGCTTATCTATTCATCAAACGTACAAAGACATTTGTAATACAATATCAATGGATCAAGGATTTAGCAAGGTGGATAGCAGCATGGCATCTATTGCCCAAGCTTATAAGGCTGATGACAATTCTATGTTAAGAGATTACTTTTTTGACAAGGTTGAAAATGGCACCGTATCAGCGGGTCAACCATATGGCCTGGGAGGAAACAACATGCCATTTGTTTCACCTTCTTATAACAGTGGGGAGAGCACTATTATATCCTTCGGTGGCTGCGATGATGATGATCCAACTCACTCTGGCCTATTCGTTTCCAGCTATGACATGTTGATGGGTCAAGCACTTAAACAGAAGTCGGAAGCTGTGAATGAGAAAGAGTTTGCAAGATCTAATTCTAATTTACTTCTGAATACAGCCCACACATCTGCATCTGAAACTGAAAGTGTTTCCAAGACAAAAGAAGAGATAAAGATGTCTAAGAAAGCTACTTCAAACAACTTCCCTTCAAATGTCAGAAGTTTGCTATCCACTGGCATGCTTGATGGTGTCTCTGTAAAGTATAAGGCTTGGTCGCGGGAGAAGGAGCTTCGAGGAGTTATAAAAGGTGCTGGGTATTTATGCAGTTGTCAGTCTTGTAATTTTTCCAAGGTTATTAATGCATATGAGTTTGAACGACATGCTGGTTGCAAGACAAAACACCCTAATAATCATATTTACTTTGAGAGTGGGAAAACTATATATGGGGTTGTACAAGAGCTCCGGAGCACTCCGCAGAATATGTTATTTGATGTTCTCCAGACAGTAACTGGTTCAGCAATCAATCAGAAGTCCTTCCGCATTTGGAAAGAATCCTTTTTGGCTGCTGCTCGGGAACTCCAGCGCATTTGTGGAAAAGATGAAGTAAAGCAGCTATTATAA 1611 0.4047 MSFPNQAFWMAKDTGSLNDGDMTCDDSSRLESKRAHQWFMDAPEAELFPNKKQAVAPPNNLLSGMLNSNLSSWGNSSSFQPLTDDFTEQLFDPDTATTNHGDANISSVSMDNKLGGERKDSMNPYGSAPSFGLSMSCTLDDPCLVFNYDGIRKVKVNEVKESHNGMSVPENNPYDNGVSSTVLNPQAYKGDDSSMSMNLAYTKGDANIISMDDPYCRTDNSLMSVVQSHNKGEDGLSIHQTYKDICNTISMDQGFSKVDSSMASIAQAYKADDNSMLRDYFFDKVENGTVSAGQPYGLGGNNMPFVSPSYNSGESTIISFGGCDDDDPTHSGLFVSSYDMLMGQALKQKSEAVNEKEFARSNSNLLLNTAHTSASETESVSKTKEEIKMSKKATSNNFPSNVRSLLSTGMLDGVSVKYKAWSREKELRGVIKGAGYLCSCQSCNFSKVINAYEFERHAGCKTKHPNNHIYFESGKTIYGVVQELRSTPQNMLFDVLQTVTGSAINQKSFRIWKESFLAAARELQRICGKDEVKQLL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121545g00002 536 MobiDBLite consensus disorder prediction 94 122 - -
Stsc121545g00002 536 MobiDBLite consensus disorder prediction 371 395 - -
Stsc121545g00002 536 MobiDBLite consensus disorder prediction 94 111 - -
Stsc121545g00002 536 Pfam Tify domain binding domain 429 484 IPR032308 -
Stsc121545g00002 536 PANTHER AUTOIMMUNE REGULATOR 8 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121545g00002 Stsc-Chr121545 7187 10695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121545g00002 364 516 PHD Transcription Factor Family AT3G53680 50.980 4.69e-45 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121545g00002 - - mtr:25484103 673.7