Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121535g00005 ATGCATTGGACATTCTCAAACAAAGTCTCGTCCTCTCCTCAGTTCTTGTCCTTCAAGACGACACTGGAAGATGCGCAGAGAAAGACAATTATGGATCCACTAGCTTCATCTGGATATATGACCATATCAACTAAGTCTTCTTATGACACTGAACAGAAATCATTGTTGAGTGTGGTCCAGAGGAACATGTCCATAGGAAATCAAGCAGCAAACAACATTGGAATGACAGTGTATCCGCGGCCATGTTCTGGTGCACATTCAGCTAGCCAACTACAGGAATCAAGGATGTTTTCACTTTCCAGCCAAACGAATCAAGTGAGTCCTGTTCTTCAATCTAACCTTGCTACTACTACCGGATGCAGCATGGGCGCTTCAGTCATAAAACCACAACCCCTCGGTCCCAAATCCTCTGGCTCACCTCTATCTGCTCTTCCATCTGCAGGTTCCATTGTTGGCACTACTGACTTAAGGAATTCTTCCAAGACTTCTGGGACACCTACTCAGCTGACCATTTTCTATGCTGGTTCTGTATGTGTTTATGACGACATATCGCCCGAGAAGGCCCATGCTATCATGTTACTTGCTGGAAATGGCTCTCCTCTAAATCAGAACAACACAGTTCCCACAACTAAGTTGCAGCCAGCAATGTCTGTTCCCTCCAAGGATAATGGTTTCATTGCAAGCATGCCAATCTCTCTTCCAGCGACTTCTCTCGCTGTTTCTCTGCCTGGAGGAGTGTCTTCCAGCAGCAATGAAATCTCAATCATTAGACCAGTGGCGGTAGGACCTTCCACTGCCTGTACCAACAACATGGAATCTCCTAATGTTGCTTCAGTAAGATCTGCAGCTCAAAAAATGGTTAATACAGGTTTGCCTCAGGCACGCAAAGCATCGTTAGCTCGGTTCTTGGAGAAGCGAAAGGAAAGGGTCATGAACACATCTCCATACACTTTAAGCAAGAAATCTTCAGCTGAAAGCAGCAATCCTGGATCAGATGGTATTAGTCTTTCCATGAACTCCTCCGGTTCCTGTCCGGTACTGGCGATTAACTAA 1053 0.4558 MHWTFSNKVSSSPQFLSFKTTLEDAQRKTIMDPLASSGYMTISTKSSYDTEQKSLLSVVQRNMSIGNQAANNIGMTVYPRPCSGAHSASQLQESRMFSLSSQTNQVSPVLQSNLATTTGCSMGASVIKPQPLGPKSSGSPLSALPSAGSIVGTTDLRNSSKTSGTPTQLTIFYAGSVCVYDDISPEKAHAIMLLAGNGSPLNQNNTVPTTKLQPAMSVPSKDNGFIASMPISLPATSLAVSLPGGVSSSSNEISIIRPVAVGPSTACTNNMESPNVASVRSAAQKMVNTGLPQARKASLARFLEKRKERVMNTSPYTLSKKSSAESSNPGSDGISLSMNSSGSCPVLAIN 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121535g00005 350 ProSiteProfiles Tify domain profile. 162 197 IPR010399 -
Stsc121535g00005 350 Pfam Jas motif 292 316 IPR018467 -
Stsc121535g00005 350 SMART tify_2 162 197 IPR010399 -
Stsc121535g00005 350 MobiDBLite consensus disorder prediction 311 338 - -
Stsc121535g00005 350 Pfam tify domain 165 196 IPR010399 -
Stsc121535g00005 350 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 90 328 IPR040390 -
Stsc121535g00005 350 MobiDBLite consensus disorder prediction 312 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121535g00005 Stsc-Chr121535 10970 13515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121535g00005 1 325 Tify Gene Family AT3G17860 42.771 9.19e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Stsc121535g00005 tify 1.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121535g00005 K13464 - gmx:100807288 373.629