Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc121532g00003 ATGATTTCAGTTAGTGGAGTGTATGCATGTGATGATGCTGAAGCTGTTAGCACAAGTAGAAGAGCTCTAAGAGGAGCAAAAGTTCCTGAAAGTGATTTTACAACCCTACCTAATGGCTTGAAGTACTATGATTTGAAGGTTGGGGAAGGAGCCGAGGCTGTAAAAGGATCTCGTGTCGCAGTTCACTATGTTGCTAAGTGGAGAGGTATCACATTTATGACTAGTAGACAAGGAATGGGTGTTGGAGGAGGAACGCCCTATGGATTTGATGTAGGAGAATCAGAGAGGGGAAATGTTCTTAAAGGGTTGGATTTAGGTGTACAAGGCATGAGAGTTGGAGGCCAGAGATTACTAATTGTTCCTCCTGAACTTGCCTATGGAAAGAAGGGAATCCAGGAAATACCTCCAAATGCAACAATAGAGGTGGATGTTGAACTGCTTTCAATCAAACAAAGTCCATTCGGGACTGCTGTAAAGATCGTTGAAGGTTAA 492 0.4289 MISVSGVYACDDAEAVSTSRRALRGAKVPESDFTTLPNGLKYYDLKVGEGAEAVKGSRVAVHYVAKWRGITFMTSRQGMGVGGGTPYGFDVGESERGNVLKGLDLGVQGMRVGGQRLLIVPPELAYGKKGIQEIPPNATIEVDVELLSIKQSPFGTAVKIVEG 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc121532g00003 163 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 29 158 - -
Stsc121532g00003 163 SUPERFAMILY FKBP-like 27 150 - -
Stsc121532g00003 163 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 147 IPR001179 GO:0003755
Stsc121532g00003 163 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 56 150 IPR001179 GO:0003755
Stsc121532g00003 163 Gene3D - 11 157 IPR046357 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc121532g00003 Stsc-Chr121532 11449 12618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc121532g00003 45 149 Calmodulin-binding Proteins AT5G48570 32.727 9.96e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc121532g00003 - - jre:109008466 297.745